ggKbase home page

Ig8144_scaffold_579

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig8144_scaffold_579_1
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..576
DNA (576bp) protein (192aa)
Uncharacterized protein Tax=Lachnospiraceae bacterium A2 RepID=R9KS68_9FIRM
Negative regulator of genetic competence, sporulation and motility
Tax=BJP_IG2102_Clostridiales_34_350
Ig8144_scaffold_579_2
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(630..941)
DNA (312bp) protein (104aa)
UPF0345 protein Cspa_c35110 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1N1C3_9CLOT
hypothetical protein
Tax=BJP_IG2102_Clostridiales_34_350
Ig8144_scaffold_579_3
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1185..1847
DNA (663bp) protein (221aa)
CBS domain pair protein Tax=Eubacterium sp. CAG:274 RepID=R6P8W0_9FIRM
hypothetical protein
Tax=BJP_IG2157_Clostridiales_35_16
Ig8144_scaffold_579_4
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2070..2771)
DNA (702bp) protein (234aa)
Branched-chain amino acid abc transporter, ATP-binding protein Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0TFK9_HELMI
branched-chain amino acid abc transporter ATP-binding protein
Tax=BJP_IG2157_Clostridiales_35_16
Ig8144_scaffold_579_5
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2783..3547)
DNA (765bp) protein (255aa)
High-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AWH4_CLOA9
livG1; high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG
Tax=BJP_IG2157_Clostridiales_35_16
Ig8144_scaffold_579_6
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3562..4581)
DNA (1020bp) protein (340aa)
High-affinity branched-chain amino acid ABC transporter system permease protein LivM Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AZH5_CLOA9
livM1; high-affinity branched-chain amino acid ABC transporter system permease LivM
Tax=BJP_IG2102_Clostridiales_34_350
Ig8144_scaffold_579_7
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4591..5472)
DNA (882bp) protein (294aa)
Inner-membrane translocator Tax=Sebaldella termitidis (strain ATCC 33386 / NCTC 11300) RepID=D1ALD9_SEBTE
inner-membrane translocator
Tax=BJP_IG2157_Clostridiales_35_16
Ig8144_scaffold_579_8
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5775..7025)
DNA (1251bp) protein (417aa)
ABC transporter branched-chain amino acid-binding protein LivK Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AZP0_CLOA9
livK1; branched-chain amino acid ABC transporter substrate-binding protein LivK
Tax=BJP_IG2157_Clostridiales_35_16
Ig8144_scaffold_579_9
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7265..7468)
DNA (204bp) protein (68aa)
Uncharacterized protein Tax=Firmicutes bacterium CAG:194 RepID=R5QS38_9FIRM
hypothetical protein
Tax=BJP_IG2157_Clostridiales_35_16
Ig8144_scaffold_579_10
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7536..8240)
DNA (705bp) protein (235aa)
Transcriptional regulator Tax=Clostridium termitidis CT1112 RepID=S0FKA7_9CLOT
transcriptional regulator
Tax=BJP_IG2157_Clostridiales_35_16
Ig8144_scaffold_579_11
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8392..9132
DNA (741bp) protein (247aa)
Pyruvate formate-lyase 1-activating enzyme Tax=Thermoanaerobacterium thermosaccharolyticum M0795 RepID=L0IIM6_THETR
pyruvate formate-lyase 1-activating enzyme
Tax=BJP_IG2157_Clostridiales_35_16
Ig8144_scaffold_579_12
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9207..9374
DNA (168bp) protein (56aa)
Ferredoxin Tax=Finegoldia magna RepID=B0S2F2_FINM2
ferredoxin
Tax=BJP_IG2102_Clostridiales_34_350
Ig8144_scaffold_579_13
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9497..10120)
DNA (624bp) protein (208aa)
Predicted transcriptional regulators Tax=Clostridium sp. CAG:590 RepID=R5EA59_9CLOT
Predicted transcriptional regulators
Tax=BJP_IG2157_Clostridiales_35_16
Ig8144_scaffold_579_14
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10359..10838)
DNA (480bp) protein (160aa)
Uncharacterized protein Tax=Firmicutes bacterium CAG:534 RepID=R7A6J2_9FIRM
hypothetical protein
Tax=BJP_IG2157_Clostridiales_35_16
Ig8144_scaffold_579_15
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10851..12245)
DNA (1395bp) protein (465aa)
Flagellin domain protein Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KL48_CLOPH
flagellin domain-containing protein
Tax=BJP_IG2157_Clostridiales_35_16
Ig8144_scaffold_579_16
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12351..12473)
DNA (123bp) protein (41aa)
Tax=BJP_IG2102_Clostridiales_34_350
Ig8144_scaffold_579_17
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12489..15803)
DNA (3315bp) protein (1105aa)
Putative uncharacterized protein bin=GWE2_Clostridiales_32_10 species=Clostridium phytofermentans genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Clostridiales_32_10 organism_group=Clostridiales
hypothetical protein
Tax=BJP_IG2157_Clostridiales_35_16
Ig8144_scaffold_579_18
unknown

Not on your lists

15947..16054
DNA (108bp) protein (36aa)

This feature has no annotations

Ig8144_scaffold_579_19
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16068..16277
DNA (210bp) protein (70aa)
Tax=BJP_IG2157_Clostridiales_35_16
Ig8144_scaffold_579_20
unknown

Not on your lists

16495..16713
DNA (219bp) protein (73aa)

This feature has no annotations

Ig8144_scaffold_579_21
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16841..17485)
DNA (645bp) protein (215aa)
Tax=BJP_IG2157_Clostridiales_35_16
Ig8144_scaffold_579_22
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17756..18301)
DNA (546bp) protein (182aa)
Uncharacterized protein Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KLF2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGL03494.1}; Flags: Precursor;; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum gibsoniae DSM 7213.;"
Ig8144_scaffold_579_23
unknown

Not on your lists

18466..18807
DNA (342bp) protein (114aa)

This feature has no annotations

Ig8144_scaffold_579_24
Desulfosporosinus acidiphilus, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18674..20002)
DNA (1329bp) protein (443aa)
Putative ATPase (AAA+ superfamily) Tax=Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4) RepID=I4DAH1_DESAJ
putative ATPase (AAA+ superfamily)
Putative ATPase (AAA+ superfamily) {ECO:0000313|EMBL:AFM42795.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4).;"
Ig8144_scaffold_579_25
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20402..21004)
DNA (603bp) protein (201aa)
Recombination protein RecR Tax=Ruminococcus obeum A2-162 RepID=D4LW81_9FIRM
recombination protein RecR
Tax=BJP_IG2157_Clostridiales_35_16
Ig8144_scaffold_579_26
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21181..21531)
DNA (351bp) protein (117aa)
Nucleoid-associated protein BN504_01502 Tax=Eubacterium sp. CAG:156 RepID=R5Z7A8_9FIRM
hypothetical protein
Tax=BJP_IG2157_Clostridiales_35_16
Ig8144_scaffold_579_27
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21559..23157)
DNA (1599bp) protein (533aa)
DNA polymerase III, subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III subunit gamma/tau Tax=Ruminococcus sp. JC304 RepID=UPI0003142145
Tax=BJP_IG2157_Clostridiales_35_16
Ig8144_scaffold_579_28
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23708..24166)
DNA (459bp) protein (153aa)
Cytosine/adenosine deaminases Tax=Clostridiales RepID=D4M289_9FIRM
Cytosine/adenosine deaminases
Tax=BJP_IG2102_Clostridiales_34_350
Ig8144_scaffold_579_29
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24281..24973
DNA (693bp) protein (231aa)
anaerobic ribonucleoside-triphosphate reductase activating protein (EC:1.97.1.4)
Anaerobic ribonucleoside-triphosphate reductase activating protein bin=GWD2_Clostridiales_32_59 species=Butyrivibrio fibrisolvens genus=Butyrivibrio taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Clostridiales_32_59 organism_group=Firmicute organism_desc=a65
Tax=BJP_IG2102_Clostridiales_34_350
Ig8144_scaffold_579_30
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25219..25980)
DNA (762bp) protein (254aa)
hypothetical protein Tax=Dehalobacter sp. FTH1 RepID=UPI000366BD56
hypothetical protein
Tax=BJP_IG2157_Clostridiales_35_16
Displaying items 1-30 of 65 in total

View Taxonomy