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bjp_ig2599_scaffold_3865

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2599_scaffold_3865_1
CG_Micra_04, Micraarchaeota, Archaea

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2..139
DNA (138bp) protein (46aa)
hypothetical protein Tax=CG_Micra_04
bjp_ig2599_scaffold_3865_2
Methanocella arvoryzae, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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145..402
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W8V1_UNCMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ35192.1}; TaxID=351160 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella arvoryzae
bjp_ig2599_scaffold_3865_3
Palaeococcus pacificus, Palaeococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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526..1812
DNA (1287bp) protein (429aa)
5-methylthioadenosine/S-adenosylhomocysteine deaminase {ECO:0000256|HAMAP-Rule:MF_01281}; Short=MTA/SAH deaminase {ECO:0000256|HAMAP-Rule:MF_01281};; EC=3.5.4.28 {ECO:0000256|HAMAP-Rule:MF_01281};; EC
5-methylthioadenosine/S-adenosylhomocysteine deaminase n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7U6N1_9EURY rbh
N-ethylammeline chlorohydrolase
bjp_ig2599_scaffold_3865_4
Ferroglobus placidus, Ferroglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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1838..2308
DNA (471bp) protein (157aa)
Flavin reductase domain protein FMN-binding protein n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S2R5_FERPA
flavin reductase
Flavin reductase domain protein FMN-binding protein {ECO:0000313|EMBL:ADC66627.1}; TaxID=589924 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Ferroglobus.;" source=
bjp_ig2599_scaffold_3865_5
unknown

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comp(2429..2725)
DNA (297bp) protein (99aa)

This feature has no annotations

bjp_ig2599_scaffold_3865_6
unknown

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3153..3527
DNA (375bp) protein (125aa)

This feature has no annotations

bjp_ig2599_scaffold_3865_7
Halobacteroides halobius, Halobacteroides, Halanaerobiales, Clostridia, Firmicutes, Bacteria

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comp(3529..4608)
DNA (1080bp) protein (360aa)
Riboflavin biosynthesis protein RibD n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0K9T8_HALHC
2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1'-reductase
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=748449 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halobacteroidaceae; Halobacteroides.;" source="Halobacter
bjp_ig2599_scaffold_3865_8
Bacillus thermoamylovorans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(4605..5162)
DNA (558bp) protein (186aa)
Riboflavin biosynthesis protein RibBA n=4 Tax=Leptospirillum RepID=J9ZBH0_LEPFM
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=35841 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source=
3,4-dihydroxy-2-butanone 4-phosphate synthase
bjp_ig2599_scaffold_3865_9
Archaeoglobus profundus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(5159..6049)
DNA (891bp) protein (297aa)
riboflavin synthase (EC:2.5.1.9)
Riboflavin synthase {ECO:0000256|PIRNR:PIRNR015750}; EC=2.5.1.9 {ECO:0000256|PIRNR:PIRNR015750};; TaxID=572546 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeo
Riboflavin synthase n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RGW6_ARCPA
bjp_ig2599_scaffold_3865_10
CG_Micra_01, Micraarchaeota, Archaea

Not on your lists

comp(6037..6666)
DNA (630bp) protein (210aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase; K02858 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12] Tax=CG_Micra_01
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Metallosphaera yellowstonensis MK1 RepID=H2C2D7_9CREN
3,4-dihydroxy-2-butanone 4-phosphate synthase
bjp_ig2599_scaffold_3865_11
Chloroherpeton thalassium, Chloroherpeton, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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6824..7447
DNA (624bp) protein (208aa)
Type II R-M system restriction endonuclease n=5 Tax=Campylobacter RepID=T2BH03_CAMCO
type II R-M system restriction endonuclease
Putative restriction endonuclease {ECO:0000313|EMBL:ACF13246.1}; TaxID=517418 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chloroherpeton.;" source="Chloroherpeton thalassium (
bjp_ig2599_scaffold_3865_12
Chloroherpeton thalassium, Chloroherpeton, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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7431..8600
DNA (1170bp) protein (390aa)
Site specific DNA-methyltransferase n=1 Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QWD4_CHLT3
site specific DNA-methyltransferase
Site specific DNA-methyltransferase {ECO:0000313|EMBL:ACF13247.1}; TaxID=517418 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chloroherpeton.;" source="Chloroherpeton thalassium
bjp_ig2599_scaffold_3865_13
unknown

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8625..8813
DNA (189bp) protein (63aa)

This feature has no annotations

bjp_ig2599_scaffold_3865_14
GWB2_OD1_rel_46_37, Azambacteria, Parcubacteria, Bacteria

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8933..10081
DNA (1149bp) protein (383aa)
thiI; tRNA sulfurtransferase ThiI (EC:2.8.1.4)
Probable tRNA sulfurtransferase n=1 Tax=Thermotoga thermarum DSM 5069 RepID=F7YUK5_9THEM
Putative tRNA sulfurtransferase {ECO:0000313|EMBL:KKU38992.1}; TaxID=1618618 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Azambacteria) bacterium GW2011_GWB2_46_37.;"
bjp_ig2599_scaffold_3865_15
CG_Micra_05, Micraarchaeota, Archaea

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comp(10104..10451)
DNA (348bp) protein (116aa)
hypothetical protein Tax=CG_Micra_05
hypothetical protein
bjp_ig2599_scaffold_3865_16
Methanocella arvoryzae, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

10574..11581
DNA (1008bp) protein (336aa)
Putative small-conductance mechanosensitive ion channel n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W3J6_UNCMA
mscS-3; putative small-conductance mechanosensitive ion channel
Putative small-conductance mechanosensitive ion channel {ECO:0000313|EMBL:CAJ37047.1}; TaxID=351160 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;"
Displaying 16 items

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