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bjp_ig3402_scaffold_2347

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig3402_scaffold_2347_1
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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590..913
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Marinimicrobia bacterium JGI 0000039-D08 RepID=UPI00039B8B91
hypothetical protein Tax=RBG_16_Gamma2_60_9_curated
bjp_ig3402_scaffold_2347_2
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

945..2426
DNA (1482bp) protein (494aa)
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase (EC:3.4.16.4); K07259 D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4) [EC:3.4
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase id=4469293 bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
bjp_ig3402_scaffold_2347_3
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

2481..3455
DNA (975bp) protein (325aa)
Peptidase M28 n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XYL7_9BACT
hypothetical protein Tax=GWA2_Ignavibacteria_54_16_curated
Predicted aminopeptidases
bjp_ig3402_scaffold_2347_4
unknown

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3474..3758
DNA (285bp) protein (95aa)

This feature has no annotations

bjp_ig3402_scaffold_2347_5
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3755..4075
DNA (321bp) protein (107aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_0073
50S ribosomal protein L12 n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37A75
prmA; ribosomal protein L11 methyltransferase
bjp_ig3402_scaffold_2347_6
Chlorobium ferrooxidans, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

4132..5049
DNA (918bp) protein (306aa)
Ppx/GppA phosphatase n=1 Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YTE9_9CHLB
Ppx/GppA phosphatase {ECO:0000313|EMBL:EAT59601.1}; TaxID=377431 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium fer
Ppx/GppA phosphatase
bjp_ig3402_scaffold_2347_7
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

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comp(5167..6327)
DNA (1161bp) protein (387aa)
cysteine desulfurase (EC:2.8.1.7); K04487 cysteine desulfurase [EC:2.8.1.7] Tax=RBG_13_WOR_2_41_10_curated
Cysteine desulfurase n=1 Tax=Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 / JW/IU-DC1) RepID=I4ABG6_DESDJ
cysteine desulfurase NifS
bjp_ig3402_scaffold_2347_8
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(6375..6890)
DNA (516bp) protein (172aa)
Uncharacterized protein id=4990638 bin=GWA2_Ignavibacteria_55_11 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
bjp_ig3402_scaffold_2347_9

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comp(6904..7500)
DNA (597bp) protein (199aa)
Marine sediment metagenome DNA, contig: S12H4_S03093 {ECO:0000313|EMBL:GAJ02118.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
bjp_ig3402_scaffold_2347_10
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(7503..8066)
DNA (564bp) protein (188aa)
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWA2_Ignavibacteria_54_16_curated
RNA polymerase, sigma-24 subunit, ECF subfamily id=4329339 bin=GWC2_Ignavibacteria_56_12 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
ECF subfamily RNA polymerase sigma-24 subunit
bjp_ig3402_scaffold_2347_11
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(8233..9867)
DNA (1635bp) protein (545aa)
60 kDa chaperonin id=3113895 bin=GWA2_Ignavibacteria_55_11 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
Chaperonin GroEL Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
Chaperonin GroEL
bjp_ig3402_scaffold_2347_12
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(9895..10179)
DNA (285bp) protein (95aa)
10 kDa chaperonin id=3903085 bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
groES; Chaperonin GroES; K04078 chaperonin GroES Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
groES; Chaperonin GroES
bjp_ig3402_scaffold_2347_13
Sporolactobacillus laevolacticus, Sporolactobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10334..10531
DNA (198bp) protein (66aa)
Membrane protein n=1 Tax=Sporolactobacillus laevolacticus DSM 442 RepID=V6IWJ1_9BACL
Membrane protein {ECO:0000313|EMBL:EST11590.1}; TaxID=1395513 species="Bacteria; Firmicutes; Bacilli; Bacillales; Sporolactobacillaceae; Sporolactobacillus.;" source="Sporolactobacillus laevolacticus
phage shock protein C, PspC
bjp_ig3402_scaffold_2347_trna_1
unknown

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10695..10767
DNA (73bp)
transferRNA
bjp_ig3402_scaffold_2347_trna_2
unknown

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10781..10855
DNA (75bp)
transferRNA
bjp_ig3402_scaffold_2347_14
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

11526..11747
DNA (222bp) protein (74aa)
Uncharacterized protein id=4385448 bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=BJP_IG2102_Ignavibacteriales_35_8
bjp_ig3402_scaffold_2347_15
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

Not on your lists

11751..12509
DNA (759bp) protein (253aa)
Putative uncharacterized protein id=1947436 bin=GWD2_Deltaproteobacteria_55_8 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
putative permease Tax=RBG_16_KB1_OP1_55_9_curated
putative permease
bjp_ig3402_scaffold_2347_16
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12545..12892
DNA (348bp) protein (116aa)
putative NADH dehydrogenase/NAD(P)H nitroreductase (EC:1.-.-.-)
Nitroreductase n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EFQ1_CLOPA
Nitroreductase {ECO:0000313|EMBL:AGK97179.1}; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum BC1.;"
bjp_ig3402_scaffold_2347_17
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

13061..13384
DNA (324bp) protein (108aa)
Uncharacterized protein id=3975620 bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=BJP_IG2102_Ignavibacteriales_35_8
bjp_ig3402_scaffold_2347_18
unknown

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13453..13617
DNA (165bp) protein (55aa)

This feature has no annotations

bjp_ig3402_scaffold_2347_19
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13614..13832
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C161_NITHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE14618.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophil
bjp_ig3402_scaffold_2347_20
RIFOXYB2_FULL_PER_ii_54_17_curated, PER-ii, Bacteria

Not on your lists

14030..14602
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZGV7_9BACT
hypothetical protein Tax=RIFOXYB2_FULL_PER_ii_54_17_curated
hypothetical protein
bjp_ig3402_scaffold_2347_21
unknown

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14797..15009
DNA (213bp) protein (71aa)

This feature has no annotations

bjp_ig3402_scaffold_2347_22
CG_Nitrosp_01, Nitrospirae, Bacteria

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15006..15356
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B41F69
radC; DNA repair protein RadC; K03630 DNA repair protein RadC Tax=CG_Nitrosp_01
DNA repair protein RadC
bjp_ig3402_scaffold_2347_23
unknown

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15346..15468
DNA (123bp) protein (41aa)

This feature has no annotations

Displaying 25 items

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