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bjp_ig3402_scaffold_228

Search features with annotation key words

Displaying items 1-30 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig3402_scaffold_228_1
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

Not on your lists

112..963
DNA (852bp) protein (284aa)
peptidase, M48 family (EC:3.4.24.-); K03799 heat shock protein HtpX [EC:3.4.24.-] Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
Protease HtpX homolog id=4876816 bin=GWA2_OP3_52_12 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
protease HtpX
bjp_ig3402_scaffold_228_2
CG_Elusi_02, Elusimicrobia, Bacteria

Not on your lists

975..1877
DNA (903bp) protein (301aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase; K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] Tax=CG_Elusi_02
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase id=1711785 bin=GWB2_CP_45_9 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
bjp_ig3402_scaffold_228_3
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

1874..2887
DNA (1014bp) protein (338aa)
translation factor; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=GWA2_Ignavibacteria_54_16_curated
Hypothetical conserved protein id=4667617 bin=GWC2_Ignavibacteria_56_12 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
sua5 superfamily-like protein
bjp_ig3402_scaffold_228_4
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

2902..3585
DNA (684bp) protein (228aa)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=uncultured bacterium RepID=K1YMR3_9BACT
5-(carboxyamino)imidazole ribonucleotide mutase Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
phosphoribosylaminoimidazole carboxylase catalytic subunit
bjp_ig3402_scaffold_228_5
unknown

Not on your lists

3759..3959
DNA (201bp) protein (67aa)

This feature has no annotations

bjp_ig3402_scaffold_228_6
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

4034..4441
DNA (408bp) protein (136aa)
BadM/Rrf2 family transcriptional regulator Tax=GWA2_Ignavibacteria_54_16_curated
Transcriptional regulator, BadM/Rrf2 family id=2754143 bin=GWA2_Ignavibacteria_55_11 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
BadM/Rrf2 family transcriptional regulator
bjp_ig3402_scaffold_228_7
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4438..5652
DNA (1215bp) protein (405aa)
iscS; cysteine desulfurase (EC:2.8.1.7); K04487 cysteine desulfurase [EC:2.8.1.7] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
cysteine desulfurase n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036B729D
class V aminotransferase
bjp_ig3402_scaffold_228_8
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

5649..5969
DNA (321bp) protein (107aa)
hypothetical protein Tax=GWC2_Ignavibacteria_rel_36_12_curated
Uncharacterized protein id=4746365 bin=GWC2_Ignavibacteria_56_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
hypothetical protein
bjp_ig3402_scaffold_228_9
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6013..6870
DNA (858bp) protein (286aa)
nifU; Fe-S cluster assembly protein NifU; K13819 NifU-like protein Tax=RBG_16_Deltaproteobacteria_48_10_curated
Nitrogen fixation protein nifU id=4978325 bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
nifU; nitrogen fixation iron-sulfur cluster assembly protein NifU
bjp_ig3402_scaffold_228_10

Not on your lists

6867..7046
DNA (180bp) protein (60aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL26307.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
bjp_ig3402_scaffold_228_11
RLO_Planctomycetes_39_13, Planctomycetes, Bacteria

Not on your lists

7043..8200
DNA (1158bp) protein (386aa)
class V aminotransferase; K04487 cysteine desulfurase [EC:2.8.1.7] Tax=RIFCSPLOWO2_12_FULL_Planctomycetes_39_13_curated
Cysteine desulfurase id=4414090 bin=GWC2_Planctomycete_KSU_39_26 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
class V aminotransferase
bjp_ig3402_scaffold_228_12
Caldalkalibacillus thermarum, Caldalkalibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8581..10050)
DNA (1470bp) protein (490aa)
Isocitrate dehydrogenase n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L777_9BACI
Isocitrate dehydrogenase {ECO:0000313|EMBL:EGL82798.1}; TaxID=986075 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Caldalkalibacillus.;" source="Caldalkalibacillus thermarum TA2.A1.
leuB; 3-isopropylmalate dehydrogenase
bjp_ig3402_scaffold_228_13
Melioribacter roseus, Melioribacter, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

10153..10578
DNA (426bp) protein (142aa)
Arsenate reductase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6Z574_MELRP
Arsenate reductase
Arsenate reductase {ECO:0000313|EMBL:AFN74305.1}; TaxID=1191523 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Melioribacteraceae; Melioribacter.;" source="Melioribacter roseus
bjp_ig3402_scaffold_228_14
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

Not on your lists

10768..10953
DNA (186bp) protein (62aa)
Arsenical-resistance protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2ANR2_9BACT
Arsenite efflux pump ACR3-like protein; K03325 arsenite transporter, ACR3 family Tax=RBG_16_Caldithrix_48_16_curated
arsenical-resistance protein
bjp_ig3402_scaffold_228_15
Candidatus Kuenenia stuttgartiensis, Candidatus Kuenenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

11026..11943
DNA (918bp) protein (306aa)
Similar to dehydratase OleE [Streptomyces antibioticus] {ECO:0000313|EMBL:CAJ72823.1}; EC=4.2.1.46 {ECO:0000313|EMBL:CAJ72823.1};; TaxID=174633 species="Bacteria; Planctomycetes; Planctomycetia; Candi
Similar to dehydratase OleE [Streptomyces antibioticus] n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PXS0_9BACT
hypothetical protein
bjp_ig3402_scaffold_228_16
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

12042..12563
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3II53_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:KHE91676.1}; TaxID=237368 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Scalindua.;" source="
lipoprotein B
bjp_ig3402_scaffold_228_17
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

12766..13281
DNA (516bp) protein (172aa)
Hydrolase, NUDIX family protein id=3016949 bin=GWA2_Ignavibacteria_55_11 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
hydrolase, NUDIX family protein Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
hydrolase, NUDIX family protein
bjp_ig3402_scaffold_228_18
GWA2_Ignavibacteriae_55_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

13357..14529
DNA (1173bp) protein (391aa)
Fmu (Sun) domain-containing protein; K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] Tax=GWA2_Ignavibacteriae_55_25_curated
Putative uncharacterized protein id=2356487 bin=GWA2_Ignavibacteria_55_11 species=Chlorobium limicola genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
Fmu (Sun) domain-containing protein
bjp_ig3402_scaffold_228_19
GWA2_Ignavibacteriae_55_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

14533..15216
DNA (684bp) protein (228aa)
hypothetical protein Tax=GWA2_Ignavibacteriae_55_25_curated
Uncharacterized protein id=2356485 bin=GWA2_Ignavibacteria_55_11 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
hypothetical protein
bjp_ig3402_scaffold_228_20
GWA2_Ignavibacteriae_55_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(15263..18103)
DNA (2841bp) protein (947aa)
excinuclease ABC, A subunit Tax=GWA2_Ignavibacteriae_55_25_curated
Excinuclease ABC, A subunit id=2356481 bin=GWA2_Ignavibacteria_55_11 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
excinuclease ABC, A subunit
bjp_ig3402_scaffold_228_21
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

18409..19497
DNA (1089bp) protein (363aa)
3-dehydroquinate synthase (EC:4.2.3.4); K01735 3-dehydroquinate synthase [EC:4.2.3.4] id=14425196 bin=bin1_lowGC species=Clostridium sp. CAG:264 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
3-dehydroquinate synthase (EC:4.2.3.4); K01735 3-dehydroquinate synthase [EC:4.2.3.4] Tax=CSP1_2_Dadabacteria
3-dehydroquinate synthase (EC:4.2.3.4)
bjp_ig3402_scaffold_228_22
R_Planctomycetes_38_41, Planctomycetes, Bacteria

Not on your lists

19494..20903
DNA (1410bp) protein (470aa)
hypothetical protein; K13832 3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25] Tax=RIFCSPHIGHO2_02_FULL_Planctomycetes_38_41_curated
3-dehydroquinate dehydratase (EC:1.1.1.25 4.2.1.10)
Uncharacterized protein id=4956657 bin=GWC2_Planctomycete_KSU_39_26 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes rbh
bjp_ig3402_scaffold_228_23
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

Not on your lists

20900..22177
DNA (1278bp) protein (426aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyru
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YJ92_9BACT
3-phosphoshikimate 1-carboxyvinyltransferase
bjp_ig3402_scaffold_228_24
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

22204..23259
DNA (1056bp) protein (352aa)
chorismate synthase (EC:4.2.3.5); K01736 chorismate synthase [EC:4.2.3.5] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
aroC; chorismate synthase (EC:4.2.3.5)
hypothetical protein n=1 Tax=Nitrospina sp. SCGC AAA288-L16 RepID=UPI00037A75AE rbh
bjp_ig3402_scaffold_228_25
unknown

Not on your lists

23341..23715
DNA (375bp) protein (125aa)
hypothetical protein
bjp_ig3402_scaffold_228_26
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

23791..24186
DNA (396bp) protein (132aa)
hypothetical protein Tax=GWC2_Ignavibacteria_rel_36_12_curated
Uncharacterized protein id=4613565 bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
HAF family extracellular repeat protein
bjp_ig3402_scaffold_228_27
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(24199..25272)
DNA (1074bp) protein (358aa)
Peptide chain release factor 1 n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AGL5_IGNAJ
prfA; protein chain release factor A
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ign
bjp_ig3402_scaffold_228_28
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(25445..26896)
DNA (1452bp) protein (484aa)
ial:IALB_0750 Membrane protein id=720520 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
membrane protein
Membrane protein {ECO:0000313|EMBL:AFH48462.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album
bjp_ig3402_scaffold_228_29
RBG_16_Deltaproteobacteria_44_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26906..27772)
DNA (867bp) protein (289aa)
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19); K00767 nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] Tax=RBG_16_Deltaproteobacteria_44_11_curated
Nicotinate-nucleotide pyrophosphorylase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6ZQ48_MELRP
nicotinate-nucleotide pyrophosphorylase
bjp_ig3402_scaffold_228_30
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27756..27932)
DNA (177bp) protein (59aa)
UPF0434 protein Despr_2812 n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RCY6_DESPD
hypothetical protein
UPF0434 protein Despr_2812 {ECO:0000256|HAMAP-Rule:MF_01187}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfo
Displaying items 1-30 of 72 in total

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