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bjp_ig3402_scaffold_3112

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig3402_scaffold_3112_1
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

comp(3..95)
DNA (93bp) protein (31aa)
Tax=BJP_IG2103_Bacteroidetes_37_22
bjp_ig3402_scaffold_3112_2
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(92..364)
DNA (273bp) protein (91aa)
mnhF; protein MnhF; K05570 multicomponent Na+:H+ antiporter subunit F Tax=CG_Syntroph_01
Multiple resistance and pH regulation protein F id=3514573 bin=GWC2_Syntrophus__56_31 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
mnhF; Na(+)/H(+) anitporter subunit MhnF
bjp_ig3402_scaffold_3112_3
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(357..971)
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI00037CC03D
cation antiporter; K05569 multicomponent Na+:H+ antiporter subunit E Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
cation antiporter
bjp_ig3402_scaffold_3112_4
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(995..2527)
DNA (1533bp) protein (511aa)
nuoM; NADH dehydrogenase I subunit M; K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3] Tax=GWA2_Ignavibacteria_54_16_curated
NADH dehydrogenase I subunit M id=5011433 bin=GWA2_Ignavibacteriae_54_16_partial species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteriae_54_16_partial organism_group=Ignavibacteria
nuoM; NADH dehydrogenase I subunit M
bjp_ig3402_scaffold_3112_5
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(2545..4473)
DNA (1929bp) protein (643aa)
nuoL; NADH dehydrogenase I subunit L; K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3] Tax=GWA2_Ignavibacteria_54_16_curated
NADH dehydrogenase I subunit L id=5011434 bin=GWA2_Ignavibacteriae_54_16_partial species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteriae_54_16_partial organism_group=Ignavibacteria
nuoL; NADH dehydrogenase I subunit L
bjp_ig3402_scaffold_3112_6
RIFOXYA2_FULL_Ignavibacteria_37_17_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(4498..4800)
DNA (303bp) protein (101aa)
nuoK; NADH dehydrogenase I subunit K; K00340 NADH-quinone oxidoreductase subunit K [EC:1.6.5.3] id=719245 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
nuoK; NADH dehydrogenase I subunit K; K00340 NADH-quinone oxidoreductase subunit K [EC:1.6.5.3] Tax=RIFOXYA2_FULL_Ignavibacteria_37_17_curated
NADH dehydrogenase subunit K
bjp_ig3402_scaffold_3112_7
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(4848..5375)
DNA (528bp) protein (176aa)
nuoJ; NADH dehydrogenase I subunit J; K00339 NADH-quinone oxidoreductase subunit J [EC:1.6.5.3] Tax=GWA2_Ignavibacteria_54_16_curated
NADH dehydrogenase I subunit J id=5011436 bin=GWA2_Ignavibacteriae_54_16_partial species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteriae_54_16_partial organism_group=Ignavibacteria
NADH dehydrogenase subunit J
bjp_ig3402_scaffold_3112_8
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(5684..6178)
DNA (495bp) protein (165aa)
id=4605565 bin=GWC2_Ignavibacteria_56_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
bjp_ig3402_scaffold_3112_9
GWA2_Ignavibacteriae_55_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(6266..7414)
DNA (1149bp) protein (383aa)
ABC-2 type transport system permease protein id=5009354 bin=GWA2_Ignavibacteriae_55_25 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteriae_55_25 organism_group=Ignavibacteria
ABC transporter permease Tax=GWA2_Ignavibacteriae_55_25_curated
ABC transporter permease
bjp_ig3402_scaffold_3112_10
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(7411..8436)
DNA (1026bp) protein (342aa)
ABC-2 type transport system ATP-binding protein id=5011438 bin=GWA2_Ignavibacteriae_54_16_partial species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteriae_54_16_partial organism_group=Ignavibacteria
ABC transporter ATP-binding protein Tax=GWA2_Ignavibacteria_54_16_curated
ABC transporter ATP-binding protein
bjp_ig3402_scaffold_3112_11
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(8436..9731)
DNA (1296bp) protein (432aa)
Asparagine--tRNA ligase id=5011439 bin=GWA2_Ignavibacteriae_54_16_partial species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteriae_54_16_partial organism_group=Ignavibacteria
asparaginyl-tRNA synthetase Tax=GWA2_Ignavibacteria_54_16_curated
asparaginyl-tRNA synthetase
bjp_ig3402_scaffold_3112_12
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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10082..13195
DNA (3114bp) protein (1038aa)
Type II restriction enzyme, methylase subunit n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NDK3_ERYLH
type II restriction enzyme, methylase subunit
Type II restriction enzyme, methylase subunit {ECO:0000313|EMBL:ABC62238.1}; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;"
bjp_ig3402_scaffold_3112_13
Methanosarcina sp. Kolksee, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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13188..14930
DNA (1743bp) protein (581aa)
Chromosome undetermined scaffold_68, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0DWY9_PARTE
hypothetical protein
TPR domain protein, putative component of TonB system {ECO:0000313|EMBL:AKB48038.1}; TaxID=1434099 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarci
bjp_ig3402_scaffold_3112_14
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(15796..17673)
DNA (1878bp) protein (626aa)
OmpA/MotB domain-containing protein Tax=GWA2_Ignavibacteria_54_16_curated
OmpA/MotB domain protein id=4899265 bin=GWA2_OP3_52_12 species=Mucilaginibacter paludis genus=Mucilaginibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
OmpA/MotB domain-containing protein
bjp_ig3402_scaffold_3112_15
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(17747..18142)
DNA (396bp) protein (132aa)
hypothetical protein Tax=GWC2_Ignavibacteria_rel_36_12_curated
Putative uncharacterized protein id=4471136 bin=GWC2_Ignavibacteria_38_9 species=Parabacteroides johnsonii genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
hypothetical protein
bjp_ig3402_scaffold_3112_16
Melioribacter roseus, Melioribacter, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(18258..18971)
DNA (714bp) protein (238aa)
TonB family protein n=1 Tax=Melioribacter roseus (strain P3M) RepID=I7A5Q4_MELRP
TonB family protein
TonB family protein {ECO:0000313|EMBL:AFN75231.1}; TaxID=1191523 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Melioribacteraceae; Melioribacter.;" source="Melioribacter roseu
bjp_ig3402_scaffold_3112_17
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(18974..19375)
DNA (402bp) protein (134aa)
Biopolymer transport protein id=4232481 bin=GWC2_Ignavibacteria_56_12 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
Biopolymer transport protein; K03559 biopolymer transport protein ExbD Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
biopolymer transport protein ExbD/TolR
bjp_ig3402_scaffold_3112_18
Melioribacter roseus, Melioribacter, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(19372..20055)
DNA (684bp) protein (228aa)
MotA/TolQ/ExbB proton channel n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6ZT57_MELRP
MotA/TolQ/ExbB proton channel
MotA/TolQ/ExbB proton channel {ECO:0000313|EMBL:AFN75229.1}; TaxID=1191523 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Melioribacteraceae; Melioribacter.;" source="Melioriba
bjp_ig3402_scaffold_3112_19
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(20325..20525)
DNA (201bp) protein (67aa)
hypothetical protein Tax=GWA2_Bacteroidetes_31_9_curated
Uncharacterized protein id=4319081 bin=GWF2_Bacteroidetes_42_66 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
hypothetical protein
bjp_ig3402_scaffold_3112_20
unknown

Not on your lists

comp(20570..22165)
DNA (1596bp) protein (532aa)

This feature has no annotations

bjp_ig3402_scaffold_3112_21
Microgenomates bacterium GW2011_GWA2_47_8, Microgenomates, Bacteria

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comp(22162..23925)
DNA (1764bp) protein (588aa)
Outer membrane assembly lipoprotein YfiO {ECO:0000313|EMBL:KKU82491.1}; TaxID=1618503 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWA2_47_8.;"
TPR repeat protein id=3650399 bin=GWA2_Ignavibacteriae_54_16_partial species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteriae_54_16_partial organism_group=Ignavibacteria
outer membrane assembly lipoprotein YfiO
Displaying 21 items

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