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bjp_ig3402_scaffold_1517

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig3402_scaffold_1517_1
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(2..2677)
DNA (2676bp) protein (892aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PND9_CHIPD id=5224609 bin=16ft_combo_ws3_JS1 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein Tax=CG_Anaero_03
hypothetical protein
bjp_ig3402_scaffold_1517_2
unknown

Not on your lists

comp(2682..2840)
DNA (159bp) protein (53aa)

This feature has no annotations

bjp_ig3402_scaffold_1517_3
unknown

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comp(3546..3797)
DNA (252bp) protein (84aa)

This feature has no annotations

bjp_ig3402_scaffold_1517_4
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

4143..4886
DNA (744bp) protein (248aa)
Putative uncharacterized protein id=3311925 bin=GWA2_Ignavibacteria_55_11 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
hypothetical protein
bjp_ig3402_scaffold_1517_5
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

4837..5118
DNA (282bp) protein (94aa)
Uncharacterized protein id=3311935 bin=GWA2_Ignavibacteria_55_11 species=unknown genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
hypothetical protein
bjp_ig3402_scaffold_1517_6
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

5486..7843
DNA (2358bp) protein (786aa)
DNA polymerase family B id=4535933 bin=GWC2_Ignavibacteria_56_12 species=unknown genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
polB; DNA polymerase elongation subunit Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
hypothetical protein
bjp_ig3402_scaffold_1517_7
GWA2_Ignavibacteriae_55_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(7857..9119)
DNA (1263bp) protein (421aa)
clpX; ATP-dependent protease Clp ATPase subunit; K03544 ATP-dependent Clp protease ATP-binding subunit ClpX Tax=GWA2_Ignavibacteriae_55_25_curated
ATP-dependent Clp protease ATP-binding subunit ClpX id=4940736 bin=GWC2_Ignavibacteria_56_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
clpX; ATP-dependent protease Clp ATPase subunit
bjp_ig3402_scaffold_1517_8
GWA2_Ignavibacteriae_55_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(9128..9742)
DNA (615bp) protein (205aa)
ATP-dependent Clp protease proteolytic subunit ClpP; K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] Tax=GWA2_Ignavibacteriae_55_25_curated
ATP-dependent Clp protease proteolytic subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit id=2358777 bin=GWA2_Ignavibacteria_55_11 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
bjp_ig3402_scaffold_1517_9
GWA2_Ignavibacteriae_55_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(9754..11022)
DNA (1269bp) protein (423aa)
trigger factor Tax=GWA2_Ignavibacteriae_55_25_curated
Trigger factor id=2358775 bin=GWA2_Ignavibacteria_55_11 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
trigger factor
bjp_ig3402_scaffold_1517_trna_1
unknown

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comp(11088..11170)
DNA (83bp)
transferRNA
bjp_ig3402_scaffold_1517_10
unknown

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comp(11326..11619)
DNA (294bp) protein (98aa)

This feature has no annotations

bjp_ig3402_scaffold_1517_11
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(11873..12304)
DNA (432bp) protein (144aa)
NADPH-dependent 7-cyano-7-deazaguanine reductase (EC:1.7.1.13); K09457 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] id=24409841 bin=RBG_19FT_COMBO_GAL15_69_19 species=Deinococcus maricopensis genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
NADPH-dependent 7-cyano-7-deazaguanine reductase (EC:1.7.1.13); K09457 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
7-cyano-7-deazaguanine reductase
bjp_ig3402_scaffold_1517_12
GWA2_Ignavibacteriae_55_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

12907..13614
DNA (708bp) protein (236aa)
Crp/Fnr family transcriptional regulator Tax=GWA2_Ignavibacteriae_55_25_curated
CRP/FNR family transcriptional regulator id=3795778 bin=GWC2_Ignavibacteria_56_12 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
CRP/FNR family transcriptional regulator
bjp_ig3402_scaffold_1517_13
GWA2_Ignavibacteriae_55_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

13648..14493
DNA (846bp) protein (282aa)
PHP domain-containing protein n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6Z7L2_MELRP
phosphoesterase PHP-like protein; K07053 Tax=GWA2_Ignavibacteriae_55_25_curated
PHP domain-containing protein
bjp_ig3402_scaffold_1517_14
RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14517..14984
DNA (468bp) protein (156aa)
riboflavin synthase; K00794 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] Tax=RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated
6,7-dimethyl-8-ribityllumazine synthase id=3654472 bin=GWA2_Ignavibacteria-rel_35_8 species=unknown genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
6,7-dimethyl-8-ribityllumazine synthase
bjp_ig3402_scaffold_1517_15
GWA2_Ignavibacteriae_55_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

14996..17218
DNA (2223bp) protein (741aa)
Putative periplasmic ligand-binding sensor domain protein Tax=GWA2_Ignavibacteriae_55_25_curated
Putative periplasmic ligand-binding sensor domain protein id=3795860 bin=GWC2_Ignavibacteria_56_12 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
periplasmic ligand-binding sensor domain-containing protein
bjp_ig3402_scaffold_1517_16
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17234..17896
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Balneola vulgaris RepID=UPI00036BF18C
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:AEN74171.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermu
bjp_ig3402_scaffold_1517_17
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists


17956..19356
DNA (1401bp) protein (467aa)
Signal recognition particle protein id=2945473 bin=GWC2_Ignavibacteria_56_12 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
signal recognition particle subunit FFH/SRP54 (srp54); K03106 signal recognition particle subunit SRP54 Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
signal recognition particle protein
bjp_ig3402_scaffold_1517_18
RBG_16_Ignavibacteria_36_9_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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19417..19851
DNA (435bp) protein (145aa)
rpsP; 30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 Tax=RBG_16_Ignavibacteria_36_9_curated
30S ribosomal protein S16 id=3587967 bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
rpsP; 30S ribosomal protein S16
bjp_ig3402_scaffold_1517_19
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

19933..20163
DNA (231bp) protein (77aa)
UPF0109 protein IALB_0776 n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AHN1_IGNAJ
Putative KH domain RNA-binding protein; K06960 Tax=CG_Ignavi_02
KH domain RNA-binding protein
bjp_ig3402_scaffold_1517_20
Paenibacillus sp. IHBB 10380, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20174..20704
DNA (531bp) protein (177aa)
Ribosome maturation factor RimM n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LTC5_CLOCD
16S rRNA processing protein RimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1566358 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" s
bjp_ig3402_scaffold_1517_21
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

20717..21394
DNA (678bp) protein (226aa)
tRNA (guanine-N1)-methyltransferase; K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase id=1827513 bin=GWA2_Ignavibacteria_55_11 species=Cesiribacter andamanensis genus=Cesiribacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
bjp_ig3402_scaffold_1517_22
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists


21428..21769
DNA (342bp) protein (114aa)
50S ribosomal protein L19 id=2945262 bin=GWC2_Ignavibacteria_56_12 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
50S ribosomal protein L19; K02884 large subunit ribosomal protein L19 Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
50S ribosomal protein L19
bjp_ig3402_scaffold_1517_23
unknown

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21954..22127
DNA (174bp) protein (58aa)

This feature has no annotations

Displaying 24 items

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