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13_1_20cm_full_scaffold_436

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Displaying items 1-30 of 31 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_436_1
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(1..882)
DNA (882bp) protein (294aa)
Two-component hybrid sensor and regulator n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89EQ6_BRADU
PAS/PAC sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
two-component hybrid sensor and regulator
13_1_20cm_full_scaffold_436_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(955..1731)
DNA (777bp) protein (259aa)
hypothetical protein; K03593 ATP-binding protein involved in chromosome partitioning Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_20cm_full_scaffold_436_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1733..2821)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB84_GEMAT
hypothetical protein; K03593 ATP-binding protein involved in chromosome partitioning Tax=RBG_16_Gemmatimonadetes_66_8_curated
ATPase-like, ParA/MinD
13_1_20cm_full_scaffold_436_4
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2940..3626
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0FW26_ECHVK
Uncharacterized protein {ECO:0000313|EMBL:EYF03325.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
hypothetical protein
13_1_20cm_full_scaffold_436_5
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3607..4500)
DNA (894bp) protein (298aa)
Peptidase families S8 and S53 domain protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FTS5_STIAD
peptidase families s8 and s53 domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:KFE66749.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyal
13_1_20cm_full_scaffold_436_6
Photobacterium sp. AK15, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4608..6386
DNA (1779bp) protein (593aa)
Uncharacterized protein n=1 Tax=Photobacterium sp. AK15 RepID=L8JG18_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:ELR66464.1}; TaxID=1056511 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium sp. AK1
hypothetical protein
13_1_20cm_full_scaffold_436_7
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(6663..7511)
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Fervidibacteria bacterium JGI 0000001-G10 RepID=UPI00035CCF3F
membrane-associated lipoprotein
Membrane-associated lipoprotein involved in thiamine biosynthesis {ECO:0000313|EMBL:AGA27013.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Si
13_1_20cm_full_scaffold_436_8
Rubinisphaera brasiliensis, Rubinisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

7606..8343
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Fervidibacteria bacterium JGI 0000001-G10 RepID=UPI0003719881
sulfatase-modifying factor protein
Sulphatase-modifying factor protein {ECO:0000313|EMBL:ADY57908.1}; Flags: Precursor;; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera
13_1_20cm_full_scaffold_436_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(8753..12277)
DNA (3525bp) protein (1175aa)
Glycosyl hydrolase family 2, sugar binding domain protein n=1 Tax=Rhodopirellula sallentina SM41 RepID=M5UKQ5_9PLAN rbh
glycoside hydrolase family 2 sugar binding protein
Glycoside hydrolase family 2 sugar binding protein {ECO:0000313|EMBL:AHG93180.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_full_scaffold_436_10
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12277..12456)
DNA (180bp) protein (60aa)
Uncharacterized protein n=2 Tax=Rhodothermus marinus RepID=D0MFR2_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY47589.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
13_1_20cm_full_scaffold_436_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12453..13862)
DNA (1410bp) protein (470aa)
Transmembrane prediction n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SI38_RHOMR rbh
transmembrane prediction
Transmembrane prediction {ECO:0000313|EMBL:AEN74094.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mar
13_1_20cm_full_scaffold_436_12
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(13867..14628)
DNA (762bp) protein (254aa)
short-chain dehydrogenase n=1 Tax=Schlesneria paludicola RepID=UPI00029A520A
short-chain dehydrogenase/reductase SDR Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
short-chain dehydrogenase/reductase SDR
13_1_20cm_full_scaffold_436_13
RLO_PLX_64_10, Bacteria

Not on your lists

comp(14645..15394)
DNA (750bp) protein (250aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003808B1E
short-chain dehydrogenase/reductase SDR
13_1_20cm_full_scaffold_436_14
Acanthamoeba castellanii, Acanthamoeba, Longamoebia, Eukaryota

Not on your lists

comp(15391..16587)
DNA (1197bp) protein (399aa)
Mandelate racemase/muconate lactonizing enzyme family protein n=1 Tax=Acanthamoeba castellanii str. Neff RepID=L8HKA8_ACACA rbh
Mandelate racemase/muconate lactonizing enzyme family protein {ECO:0000313|EMBL:ELR24846.1}; TaxID=1257118 species="Eukaryota; Amoebozoa; Discosea; Longamoebia; Centramoebida; Acanthamoebidae; Acantha
mandelate racemase/muconate lactonizing protein
13_1_20cm_full_scaffold_436_15
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(16613..17446)
DNA (834bp) protein (278aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F380_CONWI
xylose isomerase
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:ADB50360.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" sourc
13_1_20cm_full_scaffold_436_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(17494..20256)
DNA (2763bp) protein (921aa)
Alpha-L-rhamnosidase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZ16_OPITP rbh
Alpha-L-rhamnosidase {ECO:0000313|EMBL:AHG93182.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
alpha-L-rhamnosidase
13_1_20cm_full_scaffold_436_17
unknown

Not on your lists

comp(20285..20806)
DNA (522bp) protein (174aa)

This feature has no annotations

13_1_20cm_full_scaffold_436_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(20818..21255)
DNA (438bp) protein (146aa)
TonB-dependent receptor plug n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJI9_RHOM4
TonB-dependent outer membrane protein SusC/RagA, conserved site
TonB-dependent outer membrane protein SusC/RagA, conserved site {ECO:0000313|EMBL:AHG93148.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_full_scaffold_436_19
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(21263..23035)
DNA (1773bp) protein (591aa)
Putative outer membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC13_GEMAT
putative outer membrane protein
Putative outer membrane protein {ECO:0000313|EMBL:BAH40040.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (s
13_1_20cm_full_scaffold_436_20
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(23050..26472)
DNA (3423bp) protein (1141aa)
Putative outer membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC12_GEMAT rbh
Putative outer membrane protein {ECO:0000313|EMBL:BAH40039.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (s
putative outer membrane protein rbh
13_1_20cm_full_scaffold_436_21
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(26510..27448)
DNA (939bp) protein (313aa)
Anti-FecI sigma factor, FecR n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MHL0_RHOM4
FecR protein
FecR protein {ECO:0000313|EMBL:AHG89922.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_full_scaffold_436_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(27515..28111)
DNA (597bp) protein (199aa)
RNA polymerase sigma-70 factor, expansion family 1 n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5Z5W9_9PORP
RNA polymerase sigma-70 factor
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:AHG89921.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_full_scaffold_436_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(28312..29343)
DNA (1032bp) protein (344aa)
2-oxoglutarate ferredoxin oxidoreductase subunit beta; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
2-oxoglutarate ferredoxin oxidoreductase beta subunit n=1 Tax=uncultured bacterium W5-51b RepID=H9BX70_9BACT
2-oxoacid:ferredoxin oxidoreductase subunit beta
13_1_20cm_full_scaffold_436_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(29340..31103)
DNA (1764bp) protein (588aa)
2-oxoglutarate ferredoxin oxidoreductase alpha subunit n=1 Tax=uncultured bacterium W5-51b RepID=H9BX69_9BACT
pyruvate flavodoxin/ferredoxin oxidoreductase-like protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
13_1_20cm_full_scaffold_436_25
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

31186..32667
DNA (1482bp) protein (494aa)
uxaB1; tagaturonate reductase (EC:1.1.1.58)
Tagaturonate reductase {ECO:0000313|EMBL:CCH01002.1}; EC=1.1.1.58 {ECO:0000313|EMBL:CCH01002.1};; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" s
Tagaturonate reductase n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0KA49_9BACT
13_1_20cm_full_scaffold_436_26
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

32664..33332
DNA (669bp) protein (223aa)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; K01625 2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.16] Tax=RIFCSPLOW
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJK5_RHOMR
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase
13_1_20cm_full_scaffold_436_27
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

33329..34324
DNA (996bp) protein (332aa)
PfkB domain-containing protein; K00874 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Kinase, PfkB family n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQK9_9FIRM
PfkB domain-containing protein
13_1_20cm_full_scaffold_436_28
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

34321..35379
DNA (1059bp) protein (353aa)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:00002
hypothetical protein n=1 Tax=Paenibacillus terrigena RepID=UPI00037C2CFC
Mannonate dehydratase
13_1_20cm_full_scaffold_436_29
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

35376..36647
DNA (1272bp) protein (424aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI000364A9F1
major facilitator superfamily MFS_1
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AHG87912.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_full_scaffold_436_30
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

36644..37675
DNA (1032bp) protein (344aa)
Cyclic nucleotide-binding protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XK03_9BACT
ABC-type transporter, integral membrane subunit
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AHG93135.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying items 1-30 of 31 in total

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