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13_1_20cm_full_scaffold_680

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_680_1
unknown

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1..246
DNA (246bp) protein (82aa)

This feature has no annotations

13_1_20cm_full_scaffold_680_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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297..1517
DNA (1221bp) protein (407aa)
hypothetical protein n=1 Tax=Agrococcus pavilionensis RepID=UPI0003909A97
VanZ family protein
VanZ family protein {ECO:0000313|EMBL:AHG90012.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_full_scaffold_680_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(1510..1998)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4C5_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_full_scaffold_680_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1950..3308)
DNA (1359bp) protein (453aa)
ATPase (EC:3.6.-.-); K07478 putative ATPase Tax=RBG_16_Gemmatimonadetes_66_8_curated
ATPase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4C6_GEMAT rbh
MgsA AAA+ ATPase domain-containing protein
13_1_20cm_full_scaffold_680_5
unknown

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3559..3876
DNA (318bp) protein (106aa)

This feature has no annotations

13_1_20cm_full_scaffold_680_6
unknown

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3840..4316
DNA (477bp) protein (159aa)

This feature has no annotations

13_1_20cm_full_scaffold_680_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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4313..6265
DNA (1953bp) protein (651aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI00034BB89D
asparagine synthase (glutamine-hydrolyzing) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
asparagine synthase
13_1_20cm_full_scaffold_680_8
unknown

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6353..6478
DNA (126bp) protein (42aa)

This feature has no annotations

13_1_20cm_full_scaffold_680_9
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6537..7496
DNA (960bp) protein (320aa)
Hpr(Ser) kinase/phosphatase (EC:2.7.1.-)
UPI0003CFB0DF related cluster n=1 Tax=unknown RepID=UPI0003CFB0DF
Uncharacterized protein {ECO:0000313|EMBL:ESZ10224.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
13_1_20cm_full_scaffold_680_10
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

7493..8806
DNA (1314bp) protein (438aa)
hypothetical protein n=1 Tax=Paenibacillus sp. PAMC 26794 RepID=UPI00031A4E4F
hypothetical protein Tax=RBG_16_Chloroflexi_57_11_curated
13_1_20cm_full_scaffold_680_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8735..9454)
DNA (720bp) protein (240aa)
Zinc/iron transporter n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LHK3_9BACT
metal cation transporter, ZIP family Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
zinc/iron permease
13_1_20cm_full_scaffold_680_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9447..10664)
DNA (1218bp) protein (406aa)
tRNA nucleotidyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4C8_GEMAT
tRNA nucleotidyltransferase Tax=RBG_16_Gemmatimonadetes_66_8_curated
Polynucleotide adenylyltransferase region
13_1_20cm_full_scaffold_680_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10639..11406)
DNA (768bp) protein (256aa)
putative oxidoreductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4C9_GEMAT
short-chain dehydrogenase/reductase SDR
13_1_20cm_full_scaffold_680_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11403..11978)
DNA (576bp) protein (192aa)
phosphoheptose isomerase; K03271 D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Phosphoheptose isomerase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJ82_CHLTF
Phosphoheptose isomerase
13_1_20cm_full_scaffold_680_15
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

comp(11975..12589)
DNA (615bp) protein (205aa)
geranylgeranylglyceryl phosphate synthase; K07094 putative glycerol-1-phosphate prenyltransferase [EC:2.5.1.-] Tax=CG_Micra_04
pcrB; geranylgeranylglyceryl phosphate synthase (EC:2.5.1.-)
geranylgeranylglyceryl phosphate synthase n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B54552
13_1_20cm_full_scaffold_680_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12674..12985)
DNA (312bp) protein (104aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_20cm_full_scaffold_680_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


comp(12982..13785)
DNA (804bp) protein (268aa)
alaS; alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Alanine--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4D2_GEMAT
Alanine-tRNA ligase, eukaryota/bacteria
Displaying 17 items

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