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13_1_20cm_full_scaffold_946

Search features with annotation key words

Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_946_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(51..1682)
DNA (1632bp) protein (544aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NQN5_MARHT
short-chain dehydrogenase/reductase SDR Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
short-chain dehydrogenase/reductase SDR
13_1_20cm_full_scaffold_946_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1693..2409)
DNA (717bp) protein (239aa)
pseudouridine synthase Rsu; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Pseudouridine synthase n=1 Tax=uncultured Thermus/Deinococcus group bacterium RepID=H5SNE1_9DEIN
pseudouridine synthase Rsu
13_1_20cm_full_scaffold_946_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2406..2954)
DNA (549bp) protein (183aa)
Segregation and condensation protein B n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8K4_GEMAT
scpB; segregation and condensation protein B; K06024 segregation and condensation protein B Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
scpB; segregation and condensation protein B
13_1_20cm_full_scaffold_946_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2929..3669)
DNA (741bp) protein (247aa)
Segregation and condensation protein A n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8K3_GEMAT
scpA; segregation and condensation protein A; K05896 segregation and condensation protein A Tax=RBG_16_Gemmatimonadetes_66_8_curated
scpA; segregation and condensation protein A
13_1_20cm_full_scaffold_946_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(3666..4328)
DNA (663bp) protein (221aa)
Peptidase M50B family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8K2_GEMAT
peptidase M50
Peptidase M50 {ECO:0000313|EMBL:AHG90683.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_full_scaffold_946_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists


4470..4727
DNA (258bp) protein (86aa)
30S ribosomal protein S20 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RS20_GEMAT
rpsT; 30S ribosomal protein S20; K02968 small subunit ribosomal protein S20 Tax=RBG_16_Gemmatimonadetes_66_8_curated
rpsT; 30S ribosomal protein S20
13_1_20cm_full_scaffold_946_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4744..5544)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8K0_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_full_scaffold_946_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(5593..6888)
DNA (1296bp) protein (432aa)
pyrC; dihydroorotase (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
Dihydroorotase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8J8_GEMAT
dihydroorotase multifunctional complex type
13_1_20cm_full_scaffold_946_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(6888..7859)
DNA (972bp) protein (324aa)
pyrB; aspartate carbamoyltransferase (EC:2.1.3.2); K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Aspartate carbamoyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=PYRB_GEMAT
Aspartate carbamoyltransferase
13_1_20cm_full_scaffold_946_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7856..8410)
DNA (555bp) protein (185aa)
Bifunctional protein PyrR n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8J6_GEMAT
Bifunctional protein pyrR
Bifunctional protein PyrR {ECO:0000256|HAMAP-Rule:MF_01219}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_full_scaffold_946_11
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

Not on your lists

comp(8419..9366)
DNA (948bp) protein (316aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding n=1 Tax=uncultured prokaryote RepID=H5SKV3_9ZZZZ
D-isomer specific 2-hydroxyacid dehydrogenase protein Tax=RBG_16_Planctomycetes_43_13_curated
D-isomer specific 2-hydroxyacid dehydrogenase
13_1_20cm_full_scaffold_946_12
unknown

Not on your lists

comp(9366..9899)
DNA (534bp) protein (178aa)

This feature has no annotations

13_1_20cm_full_scaffold_946_trna_2
unknown

Not on your lists

comp(9981..10067)
DNA (87bp)
transferRNA
13_1_20cm_full_scaffold_946_trna_1
unknown

Not on your lists

comp(10078..10164)
DNA (87bp)
transferRNA
13_1_20cm_full_scaffold_946_13
unknown

Not on your lists

10322..10555
DNA (234bp) protein (78aa)

This feature has no annotations

13_1_20cm_full_scaffold_946_14
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10560..12080)
DNA (1521bp) protein (507aa)
Benzoate-CoA ligase family n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LVL9_HALO1 rbh
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:EYF05781.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source
benzoate-CoA ligase family
13_1_20cm_full_scaffold_946_15
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12147..12902
DNA (756bp) protein (252aa)
Creatininase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LVM0_HALO1
creatininase
Creatininase {ECO:0000313|EMBL:ACY17581.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum
13_1_20cm_full_scaffold_946_16
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12899..13681
DNA (783bp) protein (261aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LU12_HALO1
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACY17376.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" so
13_1_20cm_full_scaffold_946_17
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13678..14061
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI0003743A78
Bona fide RidA/YjgF/TdcF/RutC subgroup {ECO:0000313|EMBL:AKF07328.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;"
endoribonuclease L-PSP
13_1_20cm_full_scaffold_946_18
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14083..14883
DNA (801bp) protein (267aa)
Enoyl-CoA hydratase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XKA1_SORCE
Enoyl-CoA hydratase {ECO:0000313|EMBL:AKF07327.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinu
enoyl-CoA hydratase
13_1_20cm_full_scaffold_946_19
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14886..16037
DNA (1152bp) protein (384aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI000379B90F
Putative acyl-CoA dehydrogenase {ECO:0000313|EMBL:EZP39624.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthi
acyl-CoA dehydrogenase-like protein
13_1_20cm_full_scaffold_946_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

16034..18292
DNA (2259bp) protein (753aa)
oxidoreductase (EC:1.-.-.-); K09461 anthraniloyl-CoA monooxygenase [EC:1.14.13.40] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Oxidoreductase n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3AAA3_9PROT
salicylyl-CoA 5-hydroxylase
13_1_20cm_full_scaffold_946_21
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

18309..19091
DNA (783bp) protein (261aa)
Tryptophan 2,3-dioxygenase {ECO:0000255|HAMAP-Rule:MF_01972}; Short=TDO {ECO:0000255|HAMAP-Rule:MF_01972};; EC=1.13.11.11 {ECO:0000255|HAMAP-Rule:MF_01972};; Tryptamin 2,3-dioxygenase {ECO:0000255|HAM
Tryptophan 2,3-dioxygenase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=T23O_HERA2
tryptophan 23-dioxygenase
13_1_20cm_full_scaffold_946_22
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19099..19815
DNA (717bp) protein (239aa)
Aminotransferase n=1 Tax=Streptomyces sp. Mg1 RepID=B4VDU7_9ACTO
kynureninase Tax=GWB2_Desulfobacterales_56_26_curated
kynureninase
Displaying 24 items

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