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13_1_20cm_full_scaffold_64

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_64_1
Mycobacterium avium, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

54..464
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Actinopolyspora mortivallis RepID=UPI00035D3021
Uncharacterized protein {ECO:0000313|EMBL:KBR64836.1}; TaxID=1427296 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source=
transcriptional regulator
13_1_20cm_full_scaffold_64_2
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

461..1297
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DEL2_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA27697.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera aci
13_1_20cm_full_scaffold_64_3
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

1285..1968
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XTW0_SORCE
putative metal-dependent hydrolase Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
hypothetical protein
13_1_20cm_full_scaffold_64_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(2030..3295)
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABA5_GEMAT
RagB/SusD domain-containing protein
RagB/SusD domain-containing protein {ECO:0000313|EMBL:AHG91469.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_full_scaffold_64_5
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(3309..6260)
DNA (2952bp) protein (984aa)
Putative outer membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABA6_GEMAT rbh
putative outer membrane protein
Putative outer membrane protein {ECO:0000313|EMBL:BAH39512.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (s
13_1_20cm_full_scaffold_64_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

6492..8234
DNA (1743bp) protein (581aa)
gamma-glutamyltranspeptidase; K00681 gamma-glutamyltranspeptidase [EC:2.3.2.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Gamma-glutamyltranspeptidase n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q090F1_STIAD
gamma-glutamyltranspeptidase
13_1_20cm_full_scaffold_64_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8256..9605)
DNA (1350bp) protein (450aa)
phosphomethylpyrimidine synthase n=1 Tax=Zavarzinella formosa RepID=UPI0002E9B6D5
thiC; thiamine biosynthesis protein ThiC; K03147 thiamine biosynthesis protein ThiC Tax=GWC2_Gemmatimonadetes_71_10_curated
thiC; thiamin biosynthesis protein
13_1_20cm_full_scaffold_64_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9721..10266)
DNA (546bp) protein (182aa)
peptide deformylase; K01462 peptide deformylase [EC:3.5.1.88] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Peptide deformylase n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NLR4_MARHT
peptide deformylase
13_1_20cm_full_scaffold_64_9
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

10322..10930
DNA (609bp) protein (203aa)
Putative uncharacterized protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XWF6_9BACT
uncharacterized MobA-like protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
hypothetical protein
13_1_20cm_full_scaffold_64_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

11072..12508
DNA (1437bp) protein (479aa)
Fe-S cluster assembly protein SufB n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6ZX02_MELRP
Fe-S cluster assembly protein SufB Tax=RBG_16_Gemmatimonadetes_66_8_curated
Fe-S cluster assembly protein SufB
13_1_20cm_full_scaffold_64_11
Cellulophaga baltica, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13110..13232
DNA (123bp) protein (41aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-604-B04 RepID=UPI000361D67D
sufC; cysteine desulfurase
Cysteine desulfurase {ECO:0000313|EMBL:AIZ41105.1}; TaxID=1348584 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Cellulophaga baltica 18
13_1_20cm_full_scaffold_64_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

13229..14557
DNA (1329bp) protein (443aa)
FeS assembly protein SufD n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XEV6_9BACT
Iron-regulated ABC transporter permease protein SufD Tax=GWC2_Gemmatimonadetes_71_10_curated
FeS assembly protein SufD
13_1_20cm_full_scaffold_64_13
Cohnella sp. VKM B-2846, Cohnella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14557..15786
DNA (1230bp) protein (410aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=1590652 species="Bacteria; Firmic
hypothetical protein n=1 Tax=unclassified candidate division EM 19 RepID=UPI00037CFF17
cysteine desulfurase
13_1_20cm_full_scaffold_64_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

15767..16210
DNA (444bp) protein (148aa)
NifU-like protein n=1 Tax=Paenibacillus sp. P22 RepID=T2M164_9BACL
SUF system FeS assembly protein, NifU family
SUF system FeS assembly protein, NifU family {ECO:0000313|EMBL:AHG89621.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_full_scaffold_64_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

16235..17203
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034BDA7F
putative ABC transporter ATP-binding protein; K01990 ABC-2 type transport system ATP-binding protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
ABC transporter related protein
13_1_20cm_full_scaffold_64_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

17196..18443
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000344BF53
hypothetical membrane protein; K01992 ABC-2 type transport system permease protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical membrane protein
13_1_20cm_full_scaffold_64_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

18571..18954
DNA (384bp) protein (128aa)
S23 ribosomal protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NDE3_DESAR
S23 ribosomal protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
S23 ribosomal protein
13_1_20cm_full_scaffold_64_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

19020..20888
DNA (1869bp) protein (623aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3J5_GEMAT rbh
gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; K03495 tRNA uridine 5-carboxymethylaminomethyl modification enzyme Tax=RBG_16_Gemmatimonadetes_66_8_curated
tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG
13_1_20cm_full_scaffold_64_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

21036..21863
DNA (828bp) protein (276aa)
Chromosome (Plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PI99_9DELT
parA; chromosome partitioning protein ParA; K03496 chromosome partitioning protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Cobyrinic acid ac-diamide synthase
13_1_20cm_full_scaffold_64_20
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

21860..22771
DNA (912bp) protein (304aa)
Chromosome partitioning protein ParB n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3J2_GEMAT
parB; chromosome partitioning protein ParB; K03497 chromosome partitioning protein, ParB family Tax=GWC2_Gemmatimonadetes_71_10_curated
parB-like partition protein
13_1_20cm_full_scaffold_64_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

22768..23562
DNA (795bp) protein (265aa)
peptidase M23B (EC:3.4.24.-)
Peptidase M23B n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LQE5_THEPS
Cell wall endopeptidase, family M23/M37 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_full_scaffold_64_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

23564..23974
DNA (411bp) protein (137aa)
Integral membrane protein CcmA involved in cell shape determination n=1 Tax=Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Sio-4) RepID=I4AGF4_FLELS
Integral membrane protein CcmA involved in cell shape determination Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Integral membrane protein CcmA
13_1_20cm_full_scaffold_64_23
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

24123..24884
DNA (762bp) protein (254aa)
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVR2_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
NGG1p interacting factor 3 protein, NIF3
13_1_20cm_full_scaffold_64_24
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(24889..25968)
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6Z1_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG92075.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_full_scaffold_64_25
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(26054..26668)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6Y8_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG92076.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_full_scaffold_64_26
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(26671..27216)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEL4_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
glycoside hydrolase family 13 domain protein
13_1_20cm_full_scaffold_64_27
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(27209..27766)
DNA (558bp) protein (186aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA74_GEMAT
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
RNA polymerase sigma factor, sigma-70 family
13_1_20cm_full_scaffold_64_28
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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27916..29400
DNA (1485bp) protein (495aa)
Peptidase M20 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHQ0_KORVE
peptidase M20 Tax=GWC2_Gemmatimonadetes_71_10_curated
peptidase M20
13_1_20cm_full_scaffold_64_29
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29397..30275
DNA (879bp) protein (293aa)
Metallophosphoesterase n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YL64_9BACT
putative phosphohydrolase; K07098 Tax=GWC2_Deltaproteobacteria_55_46b_curated
putative phosphohydrolase
13_1_20cm_full_scaffold_64_30
unknown

Not on your lists

comp(30280..30564)
DNA (285bp) protein (95aa)

This feature has no annotations

Displaying items 1-30 of 37 in total

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