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13_1_20cm_full_scaffold_225

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_225_1
RBG_16_Archaea_50_20_curated, Archaea

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149..352
DNA (204bp) protein (68aa)
50S ribosomal protein L18Ae n=1 Tax=Methanocaldococcus sp. (strain FS406-22) RepID=D3S5Y5_METSF
ribosomal LX protein
Tax=RBG_16_Archaea_50_20_curated
13_1_20cm_full_scaffold_225_2
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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352..822
DNA (471bp) protein (157aa)
Prefoldin subunit alpha n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=PFDA_METKA
GIM5; prefoldin subunit alpha; K04797 prefoldin alpha subunit Tax=RBG_13_Bathyarchaeota_38_9_curated
GIM5; prefoldin subunit alpha
13_1_20cm_full_scaffold_225_3
RBG_16_Archaea_50_20_curated, Archaea

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1215..2126
DNA (912bp) protein (304aa)
Signal recognition particle receptor FtsY n=1 Tax=Thermococcus onnurineus (strain NA1) RepID=B6YUP3_THEON
signal recognition particle GTPase Tax=RBG_16_Archaea_50_20_curated
signal recognition particle GTPase
13_1_20cm_full_scaffold_225_4
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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comp(2182..2394)
DNA (213bp) protein (71aa)
Putative uncharacterized protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N4I4_9ARCH
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ47203.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum
13_1_20cm_full_scaffold_225_5
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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2623..3513
DNA (891bp) protein (297aa)
Ornithine carbamoyltransferase, catabolic {ECO:0000256|HAMAP-Rule:MF_01109}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109};; TaxID=370438 species="Bacte
Ornithine carbamoyltransferase n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D509_PELTS
ArgF; ornithine carbamoyltransferase
13_1_20cm_full_scaffold_225_6
RBG_16_Archaea_50_20_curated, Archaea

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3965..4393
DNA (429bp) protein (143aa)
Transcription elongation factor Spt5 n=2 Tax=Pyrococcus furiosus RepID=SPT5_PYRFU
nusG; transcription antitermination protein NusG; K02601 transcriptional antiterminator NusG Tax=RBG_16_Archaea_50_20_curated
nusG; transcription antitermination protein NusG
13_1_20cm_full_scaffold_225_7
RBG_16_Archaea_50_20_curated, Archaea

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4455..4862
DNA (408bp) protein (136aa)
50S ribosomal protein L11 n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1RWQ4_THEPD
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=RBG_16_Archaea_50_20_curated
50S ribosomal protein L11
13_1_20cm_full_scaffold_225_8
RBG_16_Archaea_50_20_curated, Archaea

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4875..5537
DNA (663bp) protein (221aa)
50S ribosomal protein L1 n=1 Tax=Methanobacterium sp. MB1 RepID=U6EC15_9EURY
50S ribosomal protein L1 Tax=RBG_16_Archaea_50_20_curated
rpl1p; 50S ribosomal protein L1P
13_1_20cm_full_scaffold_225_9
RBG_16_Archaea_50_20_curated, Archaea

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5542..6417
DNA (876bp) protein (292aa)
50S ribosomal protein L10 n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0EEN6_PYRF1
rpl10p; acidic ribosomal protein P0 Tax=RBG_16_Archaea_50_20_curated
50S ribosomal protein L10
13_1_20cm_full_scaffold_225_10
RBG_16_Archaea_50_20_curated, Archaea

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6477..6779
DNA (303bp) protein (101aa)
50S ribosomal protein L12 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=Q74MP7_NANEQ
rpl12p; 50S ribosomal protein L12; K02869 large subunit ribosomal protein L12 Tax=RBG_16_Archaea_50_20_curated
rpl12p; 50S ribosomal protein L12P
13_1_20cm_full_scaffold_225_11
RBG_16_Archaea_50_20_curated, Archaea

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6893..9685
DNA (2793bp) protein (931aa)
alaS; alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=RBG_16_Archaea_50_20_curated
Alanine--tRNA ligase n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZKE3_THELI
alanyl-tRNA synthetase
13_1_20cm_full_scaffold_225_12
unknown

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comp(9663..9908)
DNA (246bp) protein (82aa)

This feature has no annotations

13_1_20cm_full_scaffold_225_13
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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9933..12593
DNA (2661bp) protein (887aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1407055 species="Archaea; Thaumar
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucyl-tRNA synthetase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AR67_9ARCH rbh
13_1_20cm_full_scaffold_225_14
unknown

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comp(12600..12812)
DNA (213bp) protein (71aa)

This feature has no annotations

Displaying 14 items

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