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13_1_20cm_full_scaffold_1316

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_1316_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1..690
DNA (690bp) protein (230aa)
Type III effector Hrp-dependent outers n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CHU6_THET1
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Hrp-dependent type III effector protein
13_1_20cm_full_scaffold_1316_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

687..1712
DNA (1026bp) protein (342aa)
4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262); K00097 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262)
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TJU5_ALKMQ rbh
13_1_20cm_full_scaffold_1316_3
GWC2_Methylomirabilis_70_16, GWC2_Methylomirabilis_70_16, GWC2_Methylomirabilis_70_16, GWC2_Methylomirabilis_70_16, Methylomirabilis, Bacteria

Not on your lists

1748..1903
DNA (156bp) protein (52aa)
Peptide ABC transporter substrate-binding protein id=4797023 bin=GWC2_Methylomirabilis_70_16 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_20cm_full_scaffold_1316_4
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1918..3714
DNA (1797bp) protein (599aa)
Peptide ABC transporter substrate-binding protein n=1 Tax=Oceanibaculum indicum P24 IPR2_9PROT">RepID=K2IPR2_9PROT
peptide ABC transporter substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
peptide ABC transporter substrate-binding protein
13_1_20cm_full_scaffold_1316_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3778..4560
DNA (783bp) protein (261aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IM10_METNO
binding-protein-dependent transport system inner membrane protein; K02033 peptide/nickel transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
binding-protein-dependent transport system inner membrane protein
13_1_20cm_full_scaffold_1316_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4536..4694
DNA (159bp) protein (53aa)
Peptide/nickel transport system permease n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1ICH5_9BRAD
binding-protein-dependent transport system inner membrane protein; K02033 peptide/nickel transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
oppB; oligopeptide ABC transporter substrate-binding protein
13_1_20cm_full_scaffold_1316_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

4691..5647
DNA (957bp) protein (319aa)
peptide ABC transporter permease n=1 Tax=Elioraea tepidiphila RepID=UPI00036E0672
peptide ABC transporter permease; K02034 peptide/nickel transport system permease protein Tax=GWA2_Rokubacteria_73_35_curated
oppC; oligopeptide ABC transporter permease
13_1_20cm_full_scaffold_1316_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5644..7062
DNA (1419bp) protein (473aa)
Amidase (EC:3.5.1.4); K01426 amidase [EC:3.5.1.4] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
amidase (EC:3.5.1.4)
Amidase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZG3_RUBXD
13_1_20cm_full_scaffold_1316_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7066..8553)
DNA (1488bp) protein (496aa)
ushA; 5'-nucleotidase (EC:3.1.3.5) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ushA; 5'-nucleotidase (EC:3.1.3.5)
5'-nucleotidase n=1 Tax=uncultured prokaryote RepID=H5SKN9_9ZZZZ rbh
13_1_20cm_full_scaffold_1316_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8580..9863)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Roseovarius sp. TM1035 RepID=A6DWM5_9RHOB
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_20cm_full_scaffold_1316_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(9865..10719)
DNA (855bp) protein (285aa)
Alpha/beta hydrolase fold protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BX86_NITHN
hypothetical protein; K07019 Tax=GWA2_Rokubacteria_73_35_curated
alpha/beta hydrolase fold protein
13_1_20cm_full_scaffold_1316_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(10863..11090)
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00037CDA8B
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_20cm_full_scaffold_1316_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(11112..11393)
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00037FE601
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_20cm_full_scaffold_1316_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(11390..12055)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QUX0_RALPI
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
Displaying 14 items

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