ggKbase home page

13_1_20cm_full_scaffold_2491

Search features with annotation key words

Displaying 13 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_2491_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1..297)
DNA (297bp) protein (99aa)
HNH endonuclease n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4F5K6_MODMB
HNH endonuclease Tax=GWA2_Rokubacteria_73_35_curated
HNH endonuclease
13_1_20cm_full_scaffold_2491_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

615..1079
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037A4C3C
GCN5-ike N-acetyltransferase Tax=GWA2_Rokubacteria_73_35_curated
N-acetyltransferase GCN5
13_1_20cm_full_scaffold_2491_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1232..2395)
DNA (1164bp) protein (388aa)
membrane protein n=1 Tax=Pseudomonas pyrrocinia RepID=UPI00030A88AB
transmembrane efflux protein Tax=GWA2_Rokubacteria_73_35_curated
major facilitator superfamily protein
13_1_20cm_full_scaffold_2491_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

2427..3047
DNA (621bp) protein (207aa)
cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase (EC:2.5.1.17) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase (EC:2.5.1.17)
ATP:cob(I)alamin adenosyltransferase n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002626B46
13_1_20cm_full_scaffold_2491_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3070..3855
DNA (786bp) protein (262aa)
ABC transporter related n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07K23_RHOP5
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ABJ07711.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas
13_1_20cm_full_scaffold_2491_6
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3855..4565
DNA (711bp) protein (237aa)
livF; high-affinity branched-chain amino acid ABC transporter ATP binding protein (EC:3.6.3.-); K01996 branched-chain amino acid transport system ATP-binding protein Tax=RBG_16_Betaproteobacteria_66_2
ABC transporter related protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TJV8_9PROT
ABC transporter-like protein
13_1_20cm_full_scaffold_2491_7
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4570..5451
DNA (882bp) protein (294aa)
Branched-chain amino acid ABC-type transport system, permease component n=1 Tax=Variovorax sp. CF313 RepID=J2K0S8_9BURK
inner-membrane translocator
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
13_1_20cm_full_scaffold_2491_8
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5448..6419
DNA (972bp) protein (324aa)
Inner-membrane translocator n=1 Tax=Acidovorax sp. NO-1 RepID=H0C415_9BURK
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
inner-membrane translocator
13_1_20cm_full_scaffold_2491_9
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6467..7681
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TJV4_9PROT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
hypothetical protein
13_1_20cm_full_scaffold_2491_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(7709..9058)
DNA (1350bp) protein (450aa)
Sigma-54 dependent transcriptional regulator/response regulator n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3AB09_CARHZ
Fis family transcriptional regulator; K07713 two-component system, NtrC family, response regulator HydG Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Fis family transcriptional regulator
13_1_20cm_full_scaffold_2491_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(9064..9888)
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00036E497E
alpha/beta hydrolase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
alpha/beta hydrolase fold protein
13_1_20cm_full_scaffold_2491_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9958..10434
DNA (477bp) protein (159aa)
(2Fe-2S)-binding domain protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U5B6_9CHLR alias=RBG9_66_146,RBG9_C00066G00145 id=1247862 tax=RBG9 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein
13_1_20cm_full_scaffold_2491_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

10431..11786
DNA (1356bp) protein (452aa)
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
pth:PTH_1538 CoxL; aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs alias=RBG9_66_145,RBG9_C00066G00144 id=1247861 tax=RBG9 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein
Displaying 13 items

View Taxonomy