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13_1_20cm_full_scaffold_18

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_18_1

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comp(2..718)
DNA (717bp) protein (239aa)
Integral membrane protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T1CBF9_9ZZZZ
Integral membrane protein {ECO:0000313|EMBL:EQD63900.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
sugar transport family protein
13_1_20cm_full_scaffold_18_2
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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987..1925
DNA (939bp) protein (313aa)
Ribokinase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01R22_SOLUE
ribokinase
Ribokinase {ECO:0000313|EMBL:ABJ87898.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ell
13_1_20cm_full_scaffold_18_3
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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1993..3051
DNA (1059bp) protein (353aa)
Deoxyribose-phosphate aldolase {ECO:0000256|SAAS:SAAS00058202}; EC=4.1.2.4 {ECO:0000256|SAAS:SAAS00058202};; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granuli
Deoxyribose-phosphate aldolase n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NVN3_GRAMM rbh
deoxyribose-phosphate aldolase
13_1_20cm_full_scaffold_18_4
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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3087..5471
DNA (2385bp) protein (795aa)
Aldehyde dehydrogenase (NAD) family protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F713_ACIC5
Aldehyde dehydrogenase (NAD) family protein {ECO:0000313|EMBL:ACO32926.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium
aldehyde dehydrogenase (NAD) family protein
13_1_20cm_full_scaffold_18_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

5782..6558
DNA (777bp) protein (259aa)
2-deoxy-D-gluconate 3-dehydrogenase n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NPI7_GRAMM
Uncharacterized protein {ECO:0000313|EMBL:CDM66675.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
2-deoxy-D-gluconate 3-dehydrogenase
13_1_20cm_full_scaffold_18_6
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6597..7283)
DNA (687bp) protein (229aa)
KdgA1 protein {ECO:0000313|EMBL:CAN91396.1}; EC=4.1.3.16 {ECO:0000313|EMBL:CAN91396.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae;
KdgA1 protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F631_SORC5
kdgA1; hypothetical protein
13_1_20cm_full_scaffold_18_7

Not on your lists

comp(7314..8408)
DNA (1095bp) protein (365aa)
PfkB domain protein n=1 Tax=uncultured bacterium 293 RepID=E3T630_9BACT
PfkB domain protein {ECO:0000313|EMBL:ADC35773.1}; TaxID=698389 species="Bacteria; environmental samples.;" source="uncultured bacterium 293.;"
2-dehydro-3-deoxygluconokinase
13_1_20cm_full_scaffold_18_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(8506..9846)
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XVZ6_SORCE
Sugar phosphate permease {ECO:0000313|EMBL:CDM66676.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
13_1_20cm_full_scaffold_18_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(9865..10692)
DNA (828bp) protein (276aa)
Uncharacterized enzyme involved in inositol metabolism {ECO:0000313|EMBL:CDM64735.1}; EC=5.3.1.- {ECO:0000313|EMBL:CDM64735.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivisio
Uncharacterized enzyme involved in inositol metabolism n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NA5_SOLUE
hypothetical protein
13_1_20cm_full_scaffold_18_10

Not on your lists

comp(10877..12085)
DNA (1209bp) protein (403aa)
galactonate dehydratase (EC:4.2.1.6)
Galactonate dehydratase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJK6_RHOMR
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48729.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_20cm_full_scaffold_18_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(12140..12829)
DNA (690bp) protein (230aa)
2-deoxy-D-gluconate 3-dehydrogenase {ECO:0000313|EMBL:CDM66674.1}; EC=1.1.1.125 {ECO:0000313|EMBL:CDM66674.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XXP0_SORCE
hypothetical protein
13_1_20cm_full_scaffold_18_12
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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13207..14097
DNA (891bp) protein (297aa)
LysR family transcriptional regulator n=1 Tax=Pandoraea sp. SD6-2 RepID=R7WYP3_9BURK
LysR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
LysR family transcriptional regulator
13_1_20cm_full_scaffold_18_13
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

14681..16108
DNA (1428bp) protein (476aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036DF2DC rbh
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ADV83509.1}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain AT
13_1_20cm_full_scaffold_18_14
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

16133..17191
DNA (1059bp) protein (353aa)
pmoA
Uncharacterized protein n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZQW0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EON76399.1}; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" source="Cyclobacte
hypothetical protein
13_1_20cm_full_scaffold_18_15

Not on your lists

17290..18312
DNA (1023bp) protein (341aa)
Oxidoreductase domain protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SCB2_PEDSD
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48721.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
oxidoreductase domain-containing protein
13_1_20cm_full_scaffold_18_16
RLO_RIF05_58_11, RIF5, Bacteria

Not on your lists

18389..19510
DNA (1122bp) protein (374aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003716023 rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
hypothetical protein
13_1_20cm_full_scaffold_18_17
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(19583..23455)
DNA (3873bp) protein (1291aa)
Peptidase S53 propeptide n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NTS9_GRAMM rbh
Peptidase S53 propeptide
Peptidase S53 propeptide {ECO:0000313|EMBL:AEU36403.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC
13_1_20cm_full_scaffold_18_18
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(23703..24590)
DNA (888bp) protein (296aa)
Dihydrodipicolinate synthase/N-acetylneuraminate lyase
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I307_CALAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIE84053.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsen
13_1_20cm_full_scaffold_18_19
RLO_PLX_64_10, Bacteria

Not on your lists

comp(24587..26053)
DNA (1467bp) protein (489aa)
NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XB66_9BACT
NADH:flavin oxidoreductase Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
putative NADH-dependent oxidoreductase
13_1_20cm_full_scaffold_18_20
unknown

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comp(26050..26238)
DNA (189bp) protein (63aa)

This feature has no annotations

13_1_20cm_full_scaffold_18_21
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

26406..26846
DNA (441bp) protein (147aa)
cupin n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B6B94B
cupin
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:ADV84970.1}; Flags: Precursor;; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Ter
13_1_20cm_full_scaffold_18_22
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

27036..27872
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000371B76D
transcriptional regulator, lacI family; K02529 LacI family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
LacL family transcriptional regulator
Displaying 22 items

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