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13_1_20cm_full_scaffold_1173

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_1173_1

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comp(251..928)
DNA (678bp) protein (226aa)
PAP2 family protein n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PU18_CLOSD
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49202.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
PAP2 family protein
13_1_20cm_full_scaffold_1173_2

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1035..2414
DNA (1380bp) protein (460aa)
4-amino-4-deoxy-L-arabinose transferase or related glycosyltransferase of PMT family n=1 Tax=Methylacidiphilum infernorum (isolate V4) RepID=B3DUI6_METI4
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49203.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
arnT; 4-amino-4-deoxy-L-arabinose transferase or related glycosyltransferase of PMT family
13_1_20cm_full_scaffold_1173_3

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2599..3210
DNA (612bp) protein (204aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6N1_9BACT
Holliday junction DNA helicase RuvA
13_1_20cm_full_scaffold_1173_4

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3258..4643
DNA (1386bp) protein (462aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6M8_9BACT rbh
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49205.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_1_20cm_full_scaffold_1173_5

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4643..4852
DNA (210bp) protein (70aa)
Uncharacterized protein n=2 Tax=Parachlamydia acanthamoebae RepID=F8L1N7_PARAV
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49206.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_1_20cm_full_scaffold_1173_6

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comp(4944..5660)
DNA (717bp) protein (239aa)
TPR repeat-containing protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XHE3_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49207.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_1_20cm_full_scaffold_1173_7

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5933..7246
DNA (1314bp) protein (438aa)
MFS permease n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89FX9_BRADU
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49208.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
MFS permease
13_1_20cm_full_scaffold_1173_8
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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7315..8394
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B2A033_OPITP rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB77369.1}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strai
13_1_20cm_full_scaffold_1173_9
Streptomyces turgidiscabies, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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8645..9304
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003674BD4
short-chain dehydrogenase
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:ELP63464.1}; TaxID=698760 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" s
13_1_20cm_full_scaffold_1173_10
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9317..9760
DNA (444bp) protein (148aa)
Hydroxylaminobenzene mutase HabB {ECO:0000313|EMBL:CDX11320.1}; EC=5.4.4.1 {ECO:0000313|EMBL:CDX11320.1};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobact
hab; Putative hydroxylaminobenzene mutase Hab (EC:5.-.-.-)
Hydrogenase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FM35_9RHIZ
13_1_20cm_full_scaffold_1173_11
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9778..10260)
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C51EE
hypothetical protein Tax=GWB2_Geobacteraceae_52_12_curated
hypothetical protein
13_1_20cm_full_scaffold_1173_12
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10362..12032)
DNA (1671bp) protein (557aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6A9C5_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN33870.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella deni
13_1_20cm_full_scaffold_1173_13
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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12427..13479
DNA (1053bp) protein (351aa)
Secretion protein HlyD family protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XF65_9BACT
Secretion protein HlyD family protein {ECO:0000313|EMBL:EEF61563.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;
secretion protein HlyD family protein
13_1_20cm_full_scaffold_1173_14
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

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13489..15042
DNA (1554bp) protein (518aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XF64_9BACT rbh
DSBA oxidoreductase {ECO:0000313|EMBL:KIJ75962.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
EmrB/QacA subfamily drug resistance transporter
13_1_20cm_full_scaffold_1173_15
unknown

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comp(15048..15743)
DNA (696bp) protein (232aa)

This feature has no annotations

13_1_20cm_full_scaffold_1173_16

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16301..17404
DNA (1104bp) protein (368aa)
Acyltransferase 3 n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LP70_SYNFM
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49210.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
acyltransferase 3
13_1_20cm_full_scaffold_1173_17
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteria, Bacteria

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17468..17674
DNA (207bp) protein (69aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJQ1_KORVE
hypothetical protein
13_1_20cm_full_scaffold_1173_18

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comp(17903..18409)
DNA (507bp) protein (169aa)
Carbohydrate kinase, thermoresistant glucokinase family n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SEM1_RHOMR
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49212.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
gluconate kinase
13_1_20cm_full_scaffold_1173_19

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comp(18406..19089)
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Ponticaulis koreensis RepID=UPI0003B6DA6C
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49213.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_1_20cm_full_scaffold_1173_20
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

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comp(19655..20071)
DNA (417bp) protein (139aa)
radical SAM domain-containing protein; K04069 pyruvate formate lyase activating enzyme [EC:1.97.1.4] Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
Radical SAM domain protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZRC3_OPITP
radical SAM domain-containing protein
Displaying 20 items

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