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13_1_20cm_full_scaffold_1250

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Displaying 12 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_1250_1
unknown

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3..452
DNA (450bp) protein (150aa)

This feature has no annotations

13_1_20cm_full_scaffold_1250_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(476..1525)
DNA (1050bp) protein (350aa)
OmpA/MotB domain protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174474A
OmpA/MotB domain protein {ECO:0000313|EMBL:EDY19137.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
ompA; Outer membrane protein or related peptidoglycan-associated (lipo)protein
13_1_20cm_full_scaffold_1250_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(1597..2466)
DNA (870bp) protein (290aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopa
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CW38_9BACT
13_1_20cm_full_scaffold_1250_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(2509..3009)
DNA (501bp) protein (167aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CW37_9BACT
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:EDY21629.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthonioba
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
13_1_20cm_full_scaffold_1250_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(3067..3756)
DNA (690bp) protein (230aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rul
dihydrodipicolinate reductase (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSF7_9BACT
13_1_20cm_full_scaffold_1250_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(3898..4776)
DNA (879bp) protein (293aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:M
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CW35_9BACT
dapA; dihydrodipicolinate synthase/N-acetylneuraminate lyase
13_1_20cm_full_scaffold_1250_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(4914..5717)
DNA (804bp) protein (268aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:000
dapF; diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CW33_9BACT
13_1_20cm_full_scaffold_1250_8
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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5887..6654
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7G9_9BACT
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
hypothetical protein
13_1_20cm_full_scaffold_1250_9
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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6784..7335
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Pandoraea sp. SD6-2 RepID=R7WZC8_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAN34828.1}; TaxID=1197129 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="
13_1_20cm_full_scaffold_1250_10
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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7580..11449
DNA (3870bp) protein (1290aa)
two-component hybrid sensor and regulator (EC:2.7.3.-)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyang
Two-component hybrid sensor and regulator n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FR99_SORC5
13_1_20cm_full_scaffold_1250_11
unknown

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comp(11588..11935)
DNA (348bp) protein (116aa)

This feature has no annotations

13_1_20cm_full_scaffold_1250_trna_1
unknown

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comp(11854..11926)
DNA (73bp)
transferRNA
Displaying 12 items

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