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13_1_20cm_full_scaffold_10290

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_10290_1
Thermobaculum terrenum, Thermobaculum, Bacteria

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2..487
DNA (486bp) protein (162aa)
Transferase hexapeptide repeat containing protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CE23_THET1
transferase hexapeptide repeat containing protein
Transferase hexapeptide repeat containing protein {ECO:0000313|EMBL:ACZ41179.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
13_1_20cm_full_scaffold_10290_2
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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671..1291
DNA (621bp) protein (207aa)
Putative nudix hydrolase YeaB n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PC68_9DELT
NUDIX hydrolase {ECO:0000313|EMBL:KFA87114.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacte
NTP pyrophosphohydrolase
13_1_20cm_full_scaffold_10290_3
unknown

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comp(1303..1473)
DNA (171bp) protein (57aa)

This feature has no annotations

13_1_20cm_full_scaffold_10290_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(1575..2207)
DNA (633bp) protein (211aa)
rnhB; ribonuclease HII (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
rnhB; ribonuclease HII (RNase HII) (EC:3.1.26.4)
hypothetical protein n=1 Tax=Bacillus endophyticus RepID=UPI0002F2BBA5
13_1_20cm_full_scaffold_10290_5
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(2221..2655)
DNA (435bp) protein (145aa)
50S ribosomal protein L19 n=2 Tax=Megasphaera RepID=S7HJ43_9FIRM
50S ribosomal protein L19
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;"
13_1_20cm_full_scaffold_10290_6
RBG_16_Chloroflexi_60_22_curated, Chloroflexi, Bacteria

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comp(2680..3279)
DNA (600bp) protein (200aa)
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] Tax=RBG_16_Chloroflexi_60_22_curated
trmD; tRNA (guanine-N1)-methyltransferase (EC:2.1.1.228)
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSG7_9BACT
13_1_20cm_full_scaffold_10290_7
Dehalococcoides mccartyi, Dehalococcoides, Dehalococcoidales, Dehalococcoidia, Chloroflexi, Bacteria

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comp(3236..3811)
DNA (576bp) protein (192aa)
Ribosome maturation factor RimM n=1 Tax=Dehalococcoides ethenogenes (strain 195) RepID=RIMM_DEHE1
ribosome maturation protein RimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1432060 species="Bacteria; Chloroflexi; Dehalococcoidia; Dehalococcoidales; Dehalococcoidaceae;
13_1_20cm_full_scaffold_10290_8

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comp(3808..4044)
DNA (237bp) protein (79aa)
UPF0109 protein DealDRAFT_1977 n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GHL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KKN22010.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
putative RNA-binding protein (contains KH domain)
13_1_20cm_full_scaffold_10290_9
Leuconostoc carnosum, Leuconostoc, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(4047..4394)
DNA (348bp) protein (116aa)
30S ribosomal protein S16 n=1 Tax=Leuconostoc carnosum (strain JB16) RepID=K0DD03_LEUCJ
30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1229758 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Leuconostocaceae; Leuconostoc.;" source="Leuconostoc carnosum (strai
13_1_20cm_full_scaffold_10290_10
Caldalkalibacillus thermarum, Caldalkalibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(4385..5719)
DNA (1335bp) protein (445aa)
signal recognition particle protein Srp54 n=1 Tax=Amphibacillus jilinensis RepID=UPI000303FA16
signal recognition particle protein
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=986075 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillacea
13_1_20cm_full_scaffold_10290_11
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5712..5954)
DNA (243bp) protein (81aa)
Sigma-70, region 4 n=2 Tax=Sulfobacillus acidophilus RepID=F8I2I6_SULAT
hypothetical protein
UPF0122 protein TPY_1229 {ECO:0000256|HAMAP-Rule:MF_00245}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="
13_1_20cm_full_scaffold_10290_12
unknown

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comp(6107..6370)
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_20cm_full_scaffold_10290_13
Heliobacterium modesticaldum, Heliobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6367..7317)
DNA (951bp) protein (317aa)
Signal recognition particle receptor FtsY n=1 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0TGW9_HELMI
ftsY; signal recognition particle-docking protein ftsy
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=498761 species="Bacteria; Firmicutes; Clostridia; Clostridiale
13_1_20cm_full_scaffold_10290_14
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7329..8204)
DNA (876bp) protein (292aa)
Chromosome partition protein Smc n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PYU0_9FIRM
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=867903 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;"
chromosome segregation protein SMC
Displaying 14 items

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