ggKbase home page

13_1_20cm_full_scaffold_10321

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_10321_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

1..1113
DNA (1113bp) protein (371aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" sou
Tryptophan synthase beta chain n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5H0_9BACT
tryptophan synthase subunit beta
13_1_20cm_full_scaffold_10321_2
GWB2_Deltaproteobacteria_55_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1110..2888)
DNA (1779bp) protein (593aa)
ogt; O-GlcNAc transferase (EC:2.4.1.-) Tax=GWB2_Deltaproteobacteria_55_19_curated
ogt; O-GlcNAc transferase (EC:2.4.1.-)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Rhodopirellula europaea SH398 RepID=M5S6J9_9PLAN
13_1_20cm_full_scaffold_10321_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

2958..3839
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5H2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY18377.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_1_20cm_full_scaffold_10321_4
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

3921..4535
DNA (615bp) protein (205aa)
gmk; guanylate kinase; K00942 guanylate kinase [EC:2.7.4.8] Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
guanylate kinase (EC:2.7.4.8)
Guanylate kinase n=1 Tax=Methylacidiphilum fumariolicum SolV RepID=I0JZB3_9BACT
13_1_20cm_full_scaffold_10321_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

4652..5233
DNA (582bp) protein (194aa)
Phosphopantothenoylcysteine decarboxylase {ECO:0000313|EMBL:EDY18379.1}; EC=4.1.1.36 {ECO:0000313|EMBL:EDY18379.1};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;"
Phosphopantothenoylcysteine decarboxylase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5H4_9BACT
phosphopantothenate--cysteine ligase
13_1_20cm_full_scaffold_10321_6
Marinobacter nanhaiticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5230..5880
DNA (651bp) protein (217aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase (EC:4.1.1.36 6.3.2.5)
Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase n=1 Tax=Marinobacter nanhaiticus D15-8W RepID=N6VZF2_9ALTE
Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase {ECO:0000313|EMBL:ENO15665.1}; TaxID=626887 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromon
13_1_20cm_full_scaffold_10321_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

6315..7061
DNA (747bp) protein (249aa)
Inositol-phosphate phosphatase {ECO:0000313|EMBL:EDY18380.1}; EC=3.1.3.25 {ECO:0000313|EMBL:EDY18380.1};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Cht
inositol-phosphate phosphatase (EC:3.1.3.25)
Inositol-phosphate phosphatase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5H5_9BACT rbh
13_1_20cm_full_scaffold_10321_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

7058..7540
DNA (483bp) protein (161aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5H6_9BACT
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {E
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
13_1_20cm_full_scaffold_10321_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

7737..8522
DNA (786bp) protein (262aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:00
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5H7_9BACT
13_1_20cm_full_scaffold_10321_10
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

8512..8778
DNA (267bp) protein (89aa)
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16]
Cysteine--tRNA ligase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5H7_9BACT
13_1_20cm_full_scaffold_10321_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

9046..9585
DNA (540bp) protein (180aa)
Putative UDP-N-acetylglucosamine diphosphorylase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5H8_9BACT
Putative UDP-N-acetylglucosamine diphosphorylase {ECO:0000313|EMBL:EDY18383.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin42
gcd1; nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunit
13_1_20cm_full_scaffold_10321_trna_1
unknown

Not on your lists

comp(9642..9726)
DNA (85bp)
transferRNA
13_1_20cm_full_scaffold_10321_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(9789..10610)
DNA (822bp) protein (274aa)
Chlorite dismutase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0H2_9BACT rbh
Chlorite dismutase {ECO:0000313|EMBL:EDY19834.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_1_20cm_full_scaffold_10321_13
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

10735..13839
DNA (3105bp) protein (1035aa)
aldehyde dehydrogenase; K13821 proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.99.8 1.5.1.12] Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
Proline dehydrogenase and Delta-1-pyrroline-5-carboxylate dehydrogenase n=2 Tax=Geobacter metallireducens RepID=Q39PV7_GEOMG
putA; proline dehydrogenase and Delta-1-pyrroline-5-carboxylate dehydrogenase
13_1_20cm_full_scaffold_10321_14
unknown

Not on your lists

comp(13899..14192)
DNA (294bp) protein (98aa)

This feature has no annotations

13_1_20cm_full_scaffold_10321_15
BJP_IG2102_BRC1_58_13, BRC1, Bacteria

Not on your lists

comp(14308..15051)
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002628B3B
hypothetical protein
Tax=BJP_IG2102_BRC1_58_13
13_1_20cm_full_scaffold_10321_16
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(15256..15618)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XBQ3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF62938.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedospha
hypothetical protein
13_1_20cm_full_scaffold_10321_17
unknown

Not on your lists

15694..15930
DNA (237bp) protein (79aa)

This feature has no annotations

13_1_20cm_full_scaffold_10321_18
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

15958..16665
DNA (708bp) protein (236aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D4J2_9BACT
uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
Displaying 19 items

View Taxonomy