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13_1_20cm_full_scaffold_1372

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_1372_1
Chroococcales cyanobacterium CENA595, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(3..152)
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EG65_9CHLR
PadR family transcriptional regulator {ECO:0000313|EMBL:KJH70457.1}; TaxID=1618023 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales.;" source="Chroococcales cyanobacterium CENA59
transcriptional regulator, PadR family
13_1_20cm_full_scaffold_1372_2
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(175..330)
DNA (156bp) protein (52aa)
Uncharacterized protein {ECO:0000313|EMBL:CEL17813.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-N
13_1_20cm_full_scaffold_1372_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(695..1339)
DNA (645bp) protein (215aa)
rnhB; ribonuclease HII (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E5S9_GEOLS
13_1_20cm_full_scaffold_1372_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(1357..1731)
DNA (375bp) protein (125aa)
50S ribosomal protein L19 n=1 Tax=Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 / JW/IU-DC1) RepID=I4AC46_DESDJ
50S ribosomal protein L19 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
50S ribosomal protein L19
13_1_20cm_full_scaffold_1372_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(1751..2503)
DNA (753bp) protein (251aa)
tRNA (Guanine37-N(1)-) methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SJE6_THEM7
tRNA (Guanine37-N(1)-) methyltransferase
13_1_20cm_full_scaffold_1372_6
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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comp(2518..3036)
DNA (519bp) protein (173aa)
Ribosome maturation factor RimM n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R885_AMMDK
16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
16S rRNA processing protein RimM
13_1_20cm_full_scaffold_1372_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists


comp(3045..3293)
DNA (249bp) protein (83aa)
30S ribosomal protein S16 n=1 Tax=Leuconostoc fallax RepID=UPI00020D97C1
30S ribosomal protein S16 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
30S ribosomal protein S16
13_1_20cm_full_scaffold_1372_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(3298..4647)
DNA (1350bp) protein (450aa)
Signal recognition particle protein n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SJE2_THEM7
signal recognition particle subunit FFH/SRP54 (srp54); K03106 signal recognition particle subunit SRP54 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
signal recognition particle subunit FFH/SRP54 (srp54)
13_1_20cm_full_scaffold_1372_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

4679..5083
DNA (405bp) protein (135aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
13_1_20cm_full_scaffold_1372_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(5085..5663)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MGH4_9BACT
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
13_1_20cm_full_scaffold_1372_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5736..6065)
DNA (330bp) protein (110aa)
Cupin n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W158_9EURY
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Cupin 2 conserved barrel domain protein
13_1_20cm_full_scaffold_1372_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(6052..6699)
DNA (648bp) protein (216aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1); K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] Tax=GWA2_Rokubacteria_73_35_curated
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CKW8_DESK7
13_1_20cm_full_scaffold_1372_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6712..7314)
DNA (603bp) protein (201aa)
hypothetical protein; K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Sun protein n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SJA6_THEM7
sun protein
13_1_20cm_full_scaffold_1372_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(8002..8811)
DNA (810bp) protein (270aa)
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9); K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] Tax=GWA2_Rokubacteria_73_35_curated
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAB3_9BACT
Displaying 14 items

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