ggKbase home page

13_1_20cm_full_scaffold_14037

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_14037_trna_3
unknown

Not on your lists

comp(57..128)
DNA (72bp)
transferRNA
13_1_20cm_full_scaffold_14037_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(223..756)
DNA (534bp) protein (178aa)
SCP-like extracellular n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FA35_CONWI
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_full_scaffold_14037_2
unknown

Not on your lists

863..1156
DNA (294bp) protein (98aa)

This feature has no annotations

13_1_20cm_full_scaffold_14037_3
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

1153..1626
DNA (474bp) protein (158aa)
peptidyl-prolyl isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales;
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCQ9_CONWI
13_1_20cm_full_scaffold_14037_4
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(1580..2014)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1U2_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB54123.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woe
13_1_20cm_full_scaffold_14037_trna_2
unknown

Not on your lists

comp(2063..2133)
DNA (71bp)
transferRNA
13_1_20cm_full_scaffold_14037_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

2153..2893
DNA (741bp) protein (247aa)
Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_full_scaffold_14037_6
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(2874..3698)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UBL7_METS4
hypothetical protein Tax=RBG_16_Actinobacteria_67_10_curated
hypothetical protein
13_1_20cm_full_scaffold_14037_7
Geobacter lovleyi, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3739..3969
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3EBY8_GEOLS
Uncharacterized protein {ECO:0000313|EMBL:ACD97420.1}; TaxID=398767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter lovleyi (
hypothetical protein
13_1_20cm_full_scaffold_14037_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

3966..4745
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0C5_CONWI
hypothetical protein Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein
13_1_20cm_full_scaffold_14037_9
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(4752..5375)
DNA (624bp) protein (208aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTD5_9RHIZ
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
hypothetical protein
13_1_20cm_full_scaffold_14037_trna_1
unknown

Not on your lists

comp(5449..5522)
DNA (74bp)
transferRNA
13_1_20cm_full_scaffold_14037_10
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5540..6457
DNA (918bp) protein (306aa)
Putative permease, DMT superfamily n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RSG1_BLASD
Permease {ECO:0000313|EMBL:KGM11559.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
putative permease, DMT superfamily
13_1_20cm_full_scaffold_14037_11
Parcubacteria bacterium GW2011_GWB1_43_6, Parcubacteria, Bacteria

Not on your lists

6639..6989
DNA (351bp) protein (117aa)
Allergen V5/Tpx-1 related n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AYU6_RUBXD
Uncharacterized protein {ECO:0000313|EMBL:KKT17299.1}; TaxID=1618872 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_43_6.;"
allergen V5/Tpx-1-like protein
13_1_20cm_full_scaffold_14037_12
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7061..7498)
DNA (438bp) protein (146aa)
Response regulator n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D153_PELTS
OmpR; response regulator
Response regulator {ECO:0000313|EMBL:BAF60012.1}; TaxID=370438 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Pelotomaculum.;" source="Pelotomaculum thermopropionicum (strai
13_1_20cm_full_scaffold_14037_13
S_Thermacetogenium_phaeum_55_64, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7548..8309)
DNA (762bp) protein (254aa)
phoR2; alkaline phosphatase synthesis sensor protein PhoR (EC:2.7.13.3)
Alkaline phosphatase synthesis sensor protein PhoR n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LF58_THEPS
Alkaline phosphatase synthesis sensor protein PhoR Tax=S_Thermacetogenium_phaeum_55_64
13_1_20cm_full_scaffold_14037_14
unknown

Not on your lists

8647..9900
DNA (1254bp) protein (418aa)

This feature has no annotations

13_1_20cm_full_scaffold_14037_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

10503..11459
DNA (957bp) protein (319aa)
hydroxymethylbutenyl pyrophosphate reductase (EC:1.17.1.2); K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] Tax=RBG_16_Actinobacteria_68_12_curated
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=ISPH_ACIC1
13_1_20cm_full_scaffold_14037_16
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11798..12850
DNA (1053bp) protein (351aa)
Aminotransferase class I and II n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC 27009 / DSM 446 / 104-1A) RepID=C8WVF1_ALIAD
class I and II aminotransferase
Aminotransferase class I and II {ECO:0000313|EMBL:ACV58073.1}; TaxID=521098 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus acidoc
13_1_20cm_full_scaffold_14037_17
RLO_PLX_64_10, Bacteria

Not on your lists

comp(12847..14385)
DNA (1539bp) protein (513aa)
isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
Isoleucyl-tRNA synthetase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CG38_THET1
isoleucyl-tRNA synthetase
Displaying 20 items

View Taxonomy