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13_1_20cm_full_scaffold_1479

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_1479_1
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..975)
DNA (975bp) protein (325aa)
lpxB; lipid-A-disaccharide synthase (EC:2.4.1.182)
Lipid-A-disaccharide synthase {ECO:0000255|HAMAP-Rule:MF_00392}; EC=2.4.1.182 {ECO:0000255|HAMAP-Rule:MF_00392};; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales;
Lipid-A-disaccharide synthase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=LPXB_RHOCS rbh
13_1_20cm_full_scaffold_1479_2
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1000..1830)
DNA (831bp) protein (277aa)
UDP-2,3-diacylglucosamine pyrophosphatase n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HKC4_9PROT rbh
UDP-2,3-diacylglucosamine pyrophosphatase {ECO:0000313|EMBL:KJS39565.1}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospiri
Conserved protein of unknown function
13_1_20cm_full_scaffold_1479_3
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1820..2380)
DNA (561bp) protein (187aa)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z4M3_AZOL4
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00387, ECO:0000256|SAAS:SAAS00064156}; Short=UDP-N-acetylglucosamine acyltransferase {ECO:0000256|HAMA
lpxA; UDP-N-acetylglucosamine acyltransferase
13_1_20cm_full_scaffold_1479_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2421..2582)
DNA (162bp) protein (54aa)
UDP-N-acetylglucosamine acyltransferase (EC:2.3.1.129); K00677 UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] Tax=GWE1_Thiobacillus_62_9_curated
UDP-N-acetylglucosamine acyltransferase (EC:2.3.1.129)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=LPXA_THIDA
13_1_20cm_full_scaffold_1479_5
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2590..2946)
DNA (357bp) protein (119aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z4M2_AZOL4
fabZ; (3R)-hydroxymyristoyl-ACP dehydratase
13_1_20cm_full_scaffold_1479_6
unknown

Not on your lists

comp(2903..3019)
DNA (117bp) protein (39aa)

This feature has no annotations

13_1_20cm_full_scaffold_1479_7
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3019..4041)
DNA (1023bp) protein (341aa)
UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00523};; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodos
UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2Z8Y9_9PROT rbh
lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
13_1_20cm_full_scaffold_1479_8
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4064..4744)
DNA (681bp) protein (227aa)
Outer membrane protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NV26_AZOS1
outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:BAI72255.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp.
13_1_20cm_full_scaffold_1479_9
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4744..7107)
DNA (2364bp) protein (788aa)
Outer membrane protein assembly factor BamA n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AKY5_AZOBR rbh
membrane protein
Outer membrane protein assembly factor BamA {ECO:0000256|HAMAP-Rule:MF_01430, ECO:0000256|SAAS:SAAS00011174}; Flags: Precursor;; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodo
13_1_20cm_full_scaffold_1479_10
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7189..8334)
DNA (1146bp) protein (382aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031, ECO:0000313|EMBL:KJB97024.1}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; R
Zinc metalloprotease n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AKY4_AZOBR rbh
zinc metalloprotease
13_1_20cm_full_scaffold_1479_11
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8350..9597)
DNA (1248bp) protein (416aa)
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase (DXP reductoisomerase) (1-deoxyxylulose-5-phosphate reductoisomerase) (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:00002
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z4L9_AZOL4 rbh
13_1_20cm_full_scaffold_1479_12
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9588..10352)
DNA (765bp) protein (255aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales
phosphatidate cytidylyltransferase (EC:2.7.7.41)
Phosphatidate cytidylyltransferase n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HQV4_9PROT
13_1_20cm_full_scaffold_1479_13
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10330..10620)
DNA (291bp) protein (97aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospi
Isoprenyl transferase n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2MMM5_9PROT
undecaprenyl pyrophosphate synthase
13_1_20cm_full_scaffold_1479_14
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10692..11021)
DNA (330bp) protein (110aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospi
ispU; Undecaprenyl pyrophosphate synthetase 2 (UPP synthetase 2) (Di-trans,poly-cis-decaprenylcistransferase 2) (Undecaprenyl diphosphate synthase 2) (UDS 2) (EC:2.5.1.31)
Isoprenyl transferase n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FRA9_PHAMO
13_1_20cm_full_scaffold_1479_15
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11021..11581)
DNA (561bp) protein (187aa)
Ribosome-recycling factor n=1 Tax=Oceanibaculum indicum P24 RepID=K2KDB1_9PROT
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1207063 species="Bacteria;
Ribosome recycling factor
13_1_20cm_full_scaffold_1479_16
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11635..12228)
DNA (594bp) protein (198aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197
pyrH; UMP kinase (EC:2.7.4.22)
Uridylate kinase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TUK6_9PROT rbh
Displaying 16 items

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