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13_1_20cm_full_scaffold_15180

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_15180_1
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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2..268
DNA (267bp) protein (89aa)
histone acetyltransferase, ELP3 family (EC:2.3.1.48); K07739 elongator complex protein 3 [EC:2.3.1.48] Tax=RBG_16_Euryarchaeota_67_27_curated
Histone acetyltransferase, ELP3 family n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IGJ9_ACIB4
coproporphyrinogen III oxidase
13_1_20cm_full_scaffold_15180_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(269..1087)
DNA (819bp) protein (273aa)
Putative Ras family protein n=1 Tax=uncultured marine microorganism HF4000_APKG10F13 RepID=B3TBS9_9ZZZZ
small GTP-binding protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
small GTP-binding protein
13_1_20cm_full_scaffold_15180_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(1162..2187)
DNA (1026bp) protein (342aa)
ompA; outer membrane protein A Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
ompA; outer membrane protein A
13_1_20cm_full_scaffold_15180_4
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(2276..2890)
DNA (615bp) protein (205aa)
asparagine synthase (EC:6.3.5.4); K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_full_scaffold_15180_5
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(2895..3362)
DNA (468bp) protein (156aa)
glyS; glycine--tRNA ligase (EC:6.1.1.14) Tax=RBG_16_Euryarchaeota_68_13_curated
glycyl-tRNA synthetase (EC:6.1.1.14); K01880 glycyl-tRNA synthetase [EC:6.1.1.14] alias=gwa2_scaffold_63_16 id=5040452 tax=GW2011_AR5 species=Nanoarchaeum equitans genus=Nanoarchaeum taxon_order=unknown taxon_class=unknown phylum=Nanoarchaeota organism_desc=gwa2_.48_18
Suspect SCG annotation. See neighboring gene [13_1_20cm_full_scaffold_15180_6].
hypothetical protein
13_1_20cm_full_scaffold_15180_6
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(3377..3910)
DNA (534bp) protein (178aa)
glyS; glycine--tRNA ligase (EC:6.1.1.14) Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
Putative tRNA synthetase class II core domain (G, H, P, S and T) alias=gwa2_scaffold_32_157 id=5040025 tax=GW2011_AR20 species=uncultured marine crenarchaeote HF4000_ANIW141O9 genus=unknown taxon_order=Nitrosopumilales taxon_class=unknown phylum=Thaumarchaeota organism_desc=DELETE: see complete genome
13_1_20cm_full_scaffold_15180_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(4370..5452)
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035FA791
Cytosine deaminase-related metal-dependent hydrolase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Cytosine deaminase-related metal-dependent hydrolase
13_1_20cm_full_scaffold_15180_trna_1
unknown

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5670..5749
DNA (80bp)
transferRNA
13_1_20cm_full_scaffold_15180_8
R_OP11_Gottesmanbacteria_39_10, Gottesmanbacteria, Microgenomates, Bacteria

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comp(5829..6467)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6Q5I1_9ZZZZ
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OP11_Gottesmanbacteria_39_10_curated
putative integral membrane protein
13_1_20cm_full_scaffold_15180_9
unknown

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6602..6946
DNA (345bp) protein (115aa)

This feature has no annotations

13_1_20cm_full_scaffold_15180_10
unknown

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7160..8515
DNA (1356bp) protein (452aa)

This feature has no annotations

13_1_20cm_full_scaffold_15180_11
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(8537..8815)
DNA (279bp) protein (93aa)
Permease for cytosine/purines uracil thiamine allantoin n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L583_KORCO
cytosine/purines uracil thiamine allantoin permease Tax=RBG_16_Euryarchaeota_68_12_curated
cytosine/purines uracil thiamine allantoin permease
13_1_20cm_full_scaffold_15180_12
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(8830..9840)
DNA (1011bp) protein (337aa)
Hydroxymethylpyrimidine transporter n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N615_9ARCH
cytosine/purines uracil thiamine allantoin permease Tax=RBG_16_Euryarchaeota_68_12_curated
hydroxymethylpyrimidine transporter
13_1_20cm_full_scaffold_15180_13
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(9896..11035)
DNA (1140bp) protein (380aa)
Phosphoglycerate kinase n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HJW3_ACIS0
3-phosphoglycerate kinase Tax=RBG_16_Euryarchaeota_67_27_curated
3-phosphoglycerate kinase
Displaying 14 items

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