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13_1_20cm_full_scaffold_2220

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_2220_1
Allochromatium vinosum, Allochromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..458
DNA (456bp) protein (152aa)
V-type H(+)-translocating pyrophosphatase (EC:3.6.1.1)
K(+)-insensitive pyrophosphate-energized proton pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound proton-translocating pyrophosphatase {ECO:0000256|
K(+)-insensitive pyrophosphate-energized proton pump n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E227_9GAMM
13_1_20cm_full_scaffold_2220_2

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455..829
DNA (375bp) protein (125aa)
Methionine-R-sulfoxide reductase n=1 Tax=mine drainage metagenome RepID=T1A0D7_9ZZZZ
Methionine-R-sulfoxide reductase {ECO:0000313|EMBL:EQD54016.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
methionine-R-sulfoxide reductase
13_1_20cm_full_scaffold_2220_3
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(881..3184)
DNA (2304bp) protein (768aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GTY7_THISH
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:ACL71270.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; T
13_1_20cm_full_scaffold_2220_4

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3421..4071
DNA (651bp) protein (217aa)
Protein-L-isoaspartate(D-aspartate) O-methyltransferase {ECO:0000313|EMBL:EQD44014.1}; EC=2.1.1.77 {ECO:0000313|EMBL:EQD44014.1};; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metag
Protein-L-isoaspartate(D-aspartate) O-methyltransferase (Fragment) n=1 Tax=mine drainage metagenome RepID=T1ATH3_9ZZZZ
protein-L-isoaspartate(D-aspartate) O-methyltransferase
13_1_20cm_full_scaffold_2220_5
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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4076..5548
DNA (1473bp) protein (491aa)
type I secretion protein TolC n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000374BE18 rbh
TolC family type I secretion outer membrane protein; K12340 outer membrane channel protein Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
type I secretion protein TolC
13_1_20cm_full_scaffold_2220_6
Pseudomonas sp. BAY1663, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5545..6819)
DNA (1275bp) protein (425aa)
3-deoxy-D-manno-octulosonic-acid transferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WHN6_9GAMM rbh
3-deoxy-D-manno-octulosonic-acid transferase {ECO:0000313|EMBL:EXF45339.1}; TaxID=1439940 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" sour
3-deoxy-D-manno-octulosonic-acid transferase
13_1_20cm_full_scaffold_2220_7

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comp(6837..7598)
DNA (762bp) protein (254aa)
Lipopolysaccharide kinase {ECO:0000313|EMBL:EQD25998.1}; EC=2.7.1.- {ECO:0000313|EMBL:EQD25998.1};; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.
Lipopolysaccharide kinase (Fragment) n=1 Tax=mine drainage metagenome RepID=T0XYN1_9ZZZZ
3-deoxy-D-manno-octulosonic acid kinase
13_1_20cm_full_scaffold_2220_8

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7611..8666
DNA (1056bp) protein (352aa)
Glycosyl transferase family protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T1CA14_9ZZZZ rbh
Glycosyl transferase family protein {ECO:0000313|EMBL:EQD63245.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metageno
glycosyl transferase
13_1_20cm_full_scaffold_2220_9

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8663..9055
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T1CBW6_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD63244.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
13_1_20cm_full_scaffold_2220_10

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comp(9113..9310)
DNA (198bp) protein (66aa)
Zinc finger, CHCC-type domain protein (Fragment) n=2 Tax=mine drainage metagenome RepID=T1CC65_9ZZZZ
Zinc finger, CHCC-type domain protein {ECO:0000313|EMBL:EQD79892.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metage
hypothetical protein
13_1_20cm_full_scaffold_2220_11
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9430..10230)
DNA (801bp) protein (267aa)
(glutamate--ammonia-ligase) adenylyltransferase (EC:2.7.7.42)
Glutamate-ammonia-ligase adenylyltransferase n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0A549_ALKEH
Tax=BJP_IG2102_Gammaproteobacteria_62_140
13_1_20cm_full_scaffold_2220_12
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10227..12110)
DNA (1884bp) protein (628aa)
Glutamate-ammonia-ligase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015000}; EC=2.7.7.42 {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015004};; Glutamine-
(glutamate--ammonia-ligase) adenylyltransferase (EC:2.7.7.42)
Glutamate-ammonia-ligase adenylyltransferase n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BVL4_9GAMM
13_1_20cm_full_scaffold_2220_13
unknown

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comp(12272..12553)
DNA (282bp) protein (94aa)

This feature has no annotations

Displaying 13 items

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