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13_1_20cm_full_scaffold_2253

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_2253_1
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..1003
DNA (1002bp) protein (334aa)
5-methyltetrahydrofolate--homocysteine methyltransferase (EC:2.1.1.13)
B12-dependent methionine synthase n=1 Tax=Azospirillum amazonense Y2 RepID=G1XZR7_9PROT
B12-dependent methionine synthase {ECO:0000313|EMBL:EGY01237.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Ni
13_1_20cm_full_scaffold_2253_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(991..1587)
DNA (597bp) protein (199aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas stutzeri ATCC 14405 = CCUG 16156 RepID=H7EWM1_PSEST
Uncharacterized protein {ECO:0000313|EMBL:CDM64603.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
13_1_20cm_full_scaffold_2253_3
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1695..2441)
DNA (747bp) protein (249aa)
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055690}; Short=Monofunctional TGase {ECO:0000256|HAMAP-Rule:MF_00766};; EC=2.4.2.- {
Monofunctional biosynthetic peptidoglycan transglycosylase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8W6_9GAMM
mtgA; peptidoglycan transglycosylase
13_1_20cm_full_scaffold_2253_4
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2443..2877)
DNA (435bp) protein (145aa)
peptidylprolyl isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; Flags: Precursor;; TaxID=187272 species="Bacteria; Proteobacteria; Gammaproteobacteria
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0AA61_ALKEH
13_1_20cm_full_scaffold_2253_5
Halomonas sp. PBN3, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2874..3737)
DNA (864bp) protein (288aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltra
Release factor glutamine methyltransferase n=1 Tax=Halomonas sp. PBN3 RepID=U7P2A8_9GAMM
HemK family modification methylase
13_1_20cm_full_scaffold_2253_6
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3815..4651
DNA (837bp) protein (279aa)
Uncharacterized protein {ECO:0000313|EMBL:KGM09494.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
13_1_20cm_full_scaffold_2253_7
unknown

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4655..5617
DNA (963bp) protein (321aa)

This feature has no annotations

13_1_20cm_full_scaffold_2253_8
unknown

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5610..6896
DNA (1287bp) protein (429aa)

This feature has no annotations

13_1_20cm_full_scaffold_2253_9
Methyloglobulus morosus, Methyloglobulus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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6913..7863
DNA (951bp) protein (317aa)
Methanol dehydrogenase regulatory protein n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5BS45_9GAMM rbh
Methanol dehydrogenase regulatory protein {ECO:0000313|EMBL:ESS70674.1}; TaxID=1116472 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methyloglobulus.;" sou
ATPase
13_1_20cm_full_scaffold_2253_10
Methyloglobulus morosus, Methyloglobulus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7879..9234
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5C1L7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ESS70673.1}; TaxID=1116472 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methyloglobulus.;" source="Methyloglobul
Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage
13_1_20cm_full_scaffold_2253_11
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9155..9844)
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000381D4B0
iron-binding protein
Iron-binding protein {ECO:0000313|EMBL:AIF49533.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
13_1_20cm_full_scaffold_2253_12
Methyloglobulus morosus, Methyloglobulus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9881..10825)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5DTD1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ESS70671.1}; TaxID=1116472 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methyloglobulus.;" source="Methyloglobul
hypothetical protein
13_1_20cm_full_scaffold_2253_13
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11152..12606)
DNA (1455bp) protein (485aa)
Peptide chain release factor 1 n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4SU88_META2 rbh
prfA; peptide chain release factor 1
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales;
13_1_20cm_full_scaffold_2253_14
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12723..14573
DNA (1851bp) protein (617aa)
Uncharacterized protein n=1 Tax=Alcanivorax pacificus W11-5 RepID=K2GUA8_9GAMM
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
hypothetical protein
13_1_20cm_full_scaffold_2253_15
RBG_16_Gammaproteobacteria_57_12_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14563..15162
DNA (600bp) protein (200aa)
Outer-membrane lipoprotein LolB n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G1E0_9GAMM
outer membrane lipoprotein LolB; K02494 outer membrane lipoprotein LolB Tax=RBG_16_Gammaproteobacteria_57_12_curated
outer membrane lipoprotein LolB
13_1_20cm_full_scaffold_2253_16
Halomonas sp. PBN3, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15159..16019
DNA (861bp) protein (287aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:M
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2C-methyl-D-erythritol kinase n=1 Tax=Halomonas smyrnensis RepID=UPI0002F4261A rbh
13_1_20cm_full_scaffold_2253_trna_1
unknown

Not on your lists

16089..16160
DNA (72bp)
transferRNA
13_1_20cm_full_scaffold_2253_17
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16240..17211
DNA (972bp) protein (324aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosph
Ribose-phosphate pyrophosphokinase n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GLA6_THISH
13_1_20cm_full_scaffold_2253_18

Not on your lists


17276..17503
DNA (228bp) protein (76aa)
Ribosomal protein L25 (Fragment) n=1 Tax=mine drainage metagenome RepID=T0YQC3_9ZZZZ
Ribosomal protein L25 {ECO:0000313|EMBL:EQD35318.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
50S ribosomal protein L25
Displaying 19 items

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