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13_1_20cm_full_scaffold_239

Search features with annotation key words

Displaying items 1-30 of 33 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_239_1
unknown

Not on your lists

comp(3..83)
DNA (81bp) protein (27aa)

This feature has no annotations

13_1_20cm_full_scaffold_239_2
unknown

Not on your lists

comp(118..585)
DNA (468bp) protein (156aa)

This feature has no annotations

13_1_20cm_full_scaffold_239_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(644..1291)
DNA (648bp) protein (216aa)
putative translaldolase (EC:2.2.1.2); K00616 transaldolase [EC:2.2.1.2] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
putative translaldolase (EC:2.2.1.2)
Probable transaldolase n=1 Tax=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) RepID=TAL_CALS8
13_1_20cm_full_scaffold_239_4

Not on your lists

comp(1349..1726)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=uncultured organism RepID=M1Q2X3_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:AGF93627.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
13_1_20cm_full_scaffold_239_5

Not on your lists

comp(1731..1943)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=uncultured organism RepID=M1QC88_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:AGF93628.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
13_1_20cm_full_scaffold_239_6
Amycolatopsis lurida, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2073..3311
DNA (1239bp) protein (413aa)
Major facilitator transporter n=1 Tax=Amycolatopsis orientalis HCCB10007 RepID=R4T2Q8_AMYOR
MFS transporter
MFS transporter {ECO:0000313|EMBL:AJK55002.1}; TaxID=1460371 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis lurida NRRL 2430.;"
13_1_20cm_full_scaffold_239_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3361..4134)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YZQ0_9BACT
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
13_1_20cm_full_scaffold_239_8
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4315..4836
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMV3_NITGG
hypothetical protein
hypothetical protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
13_1_20cm_full_scaffold_239_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(4867..5805)
DNA (939bp) protein (313aa)
transketolase; K00615 transketolase [EC:2.2.1.1] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003736E9C
transketolase
13_1_20cm_full_scaffold_239_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(5823..6668)
DNA (846bp) protein (282aa)
transketolase; K00615 transketolase [EC:2.2.1.1] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Transketolase, N-terminal subunit n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5CYI8_PELTS rbh
transketolase, N-terminal subunit
13_1_20cm_full_scaffold_239_11
unknown

Not on your lists

comp(6744..6977)
DNA (234bp) protein (78aa)

This feature has no annotations

13_1_20cm_full_scaffold_239_12
unknown

Not on your lists

7277..8233
DNA (957bp) protein (319aa)

This feature has no annotations

13_1_20cm_full_scaffold_239_13
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

8325..9005
DNA (681bp) protein (227aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1); K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] Tax=RBG_16_Euryarchaeota_68_12_curated
rpe; ribulose-phosphate 3-epimerase (EC:5.1.3.1)
ribulose-phosphate 3-epimerase n=1 Tax=Bacillus acidiproducens RepID=UPI00036D91D4
13_1_20cm_full_scaffold_239_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

9078..9236
DNA (159bp) protein (53aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_full_scaffold_239_15
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(9233..9601)
DNA (369bp) protein (123aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_full_scaffold_239_16
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

9852..16961
DNA (7110bp) protein (2370aa)
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5); K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
isoleucyl-tRNA synthetase (EC:6.1.1.5)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037EC543
13_1_20cm_full_scaffold_239_17
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17078..18169)
DNA (1092bp) protein (364aa)
Extracellular repeat protein, HAF family n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M895_GEODF
extracellular repeat-containing protein, HAF family
HAF repeat protein {ECO:0000313|EMBL:ACM20363.1}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (stra
13_1_20cm_full_scaffold_239_18
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

18426..19442
DNA (1017bp) protein (339aa)
Flap endonuclease 1 n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HMZ0_ACIS0 rbh
flap structure-specific endonuclease Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
flap structure-specific endonuclease
13_1_20cm_full_scaffold_239_19
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

19501..20289
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003766F4D
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_1_20cm_full_scaffold_239_20
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(20275..21633)
DNA (1359bp) protein (453aa)
phosphoglucosamine mutase (EC:5.4.2.10); K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] Tax=RBG_16_Euryarchaeota_67_27_curated
phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=D3TB65_ACIB4
13_1_20cm_full_scaffold_239_21
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(21630..22640)
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036033DF
nucleotidyltransferase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
nucleotidyltransferase
13_1_20cm_full_scaffold_239_22
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(22689..22898)
DNA (210bp) protein (70aa)
Small nuclear ribonucleoprotein n=2 Tax=Methanomassiliicoccus RepID=U5Q212_9EURY
small nuclear ribonucleoprotein (snRNP)-like protein Tax=RBG_16_Euryarchaeota_67_27_curated
small nuclear ribonucleoprotein (snRNP)-like protein
13_1_20cm_full_scaffold_239_23
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

22981..23427
DNA (447bp) protein (149aa)
Peptidase U32 n=1 Tax=uncultured organism RepID=M1PQS3_9ZZZZ
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
Translation elongation factor-like protein
13_1_20cm_full_scaffold_239_24
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(23351..23806)
DNA (456bp) protein (152aa)
fumarate reductase subunit D; K00247 fumarate reductase subunit D Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_full_scaffold_239_25
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(23807..24106)
DNA (300bp) protein (100aa)
Fumarate reductase subunit C n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RW28_9BURK
frdC; fumarate reductase subunit C FrdC; K00246 fumarate reductase subunit C Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
fumarate reductase subunit C
13_1_20cm_full_scaffold_239_26
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(24201..24947)
DNA (747bp) protein (249aa)
frdBC; fumarate reductase iron-sulfur subunit FrdB/membrane anchor subunit FrdC (EC:1.3.99.1); K00245 fumarate reductase iron-sulfur subunit [EC:1.3.99.1]; K00246 fumarate reductase subunit C Tax=RBG_
Putative fumarate reductase n=1 Tax=Rhodococcus imtechensis RKJ300 = JCM 13270 RepID=I0WPE9_9NOCA
frdBC; putative fumarate reductase
13_1_20cm_full_scaffold_239_27
Streptomyces davawensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25213..26625
DNA (1413bp) protein (471aa)
hypothetical protein n=1 Tax=Burkholderia thailandensis RepID=UPI00016A75D7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCK27925.1}; TaxID=1214101 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces davawensis JCM 4913.;"
13_1_20cm_full_scaffold_239_28
unknown

Not on your lists

comp(26651..27541)
DNA (891bp) protein (297aa)

This feature has no annotations

13_1_20cm_full_scaffold_239_29
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

27822..28706
DNA (885bp) protein (295aa)
ABC efflux transporter, ATP-binding protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMZ7_NITGG
ABC efflux transporter, ATP-binding protein Tax=RBG_16_Euryarchaeota_67_27_curated
ABC efflux transporter, ATP-binding protein
13_1_20cm_full_scaffold_239_30
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

28711..29424
DNA (714bp) protein (238aa)
ABC efflux transporter, permease protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFB3_NITGG
ABC efflux transporter permease Tax=RBG_16_Euryarchaeota_68_13_curated
ABC efflux transporter permease
Displaying items 1-30 of 33 in total

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