ggKbase home page

13_1_20cm_full_scaffold_30

Search features with annotation key words

Displaying items 1-30 of 31 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_30_1
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

3..917
DNA (915bp) protein (305aa)
Anti-sigma-factor antagonist n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZ90_CONWI
anti-sigma-factor antagonist Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
anti-sigma-factor antagonist
13_1_20cm_full_scaffold_30_2
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

949..1341
DNA (393bp) protein (131aa)
Putative sigma activity regulator n=1 Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YUT2_NOCFA
anti-sigma-factor antagonist Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
rsbS; putative sigma activity regulator RsbS
13_1_20cm_full_scaffold_30_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1334..1744
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Burkholderia sp. JPY347 RepID=UPI0003707C03
Anti-sigma regulatory factor (Ser/Thr protein kinase) {ECO:0000313|EMBL:KCZ71458.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae;
anti-sigma regulatory factor, serine/threonine protein kinase
13_1_20cm_full_scaffold_30_4
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

1737..2378
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Burkholderia sp. JPY347 RepID=UPI0003683974
protein serine/threonine phosphatase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
protein serine/threonine phosphatase
13_1_20cm_full_scaffold_30_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

2393..3793
DNA (1401bp) protein (467aa)
Acetoacetate metabolism regulatory protein AtoC n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XJM8_SORCE
Fis family transcriptional regulator Tax=GWA2_Rokubacteria_73_35_curated
acetoacetate metabolism regulatory protein AtoC
13_1_20cm_full_scaffold_30_6
Nematostella vectensis, Nematostella, Actiniaria, Hexacorallia, Cnidaria, Metazoa

Not on your lists

3790..5082
DNA (1293bp) protein (431aa)
Predicted protein n=1 Tax=Nematostella vectensis RepID=A7S2Q6_NEMVE
Predicted protein {ECO:0000313|EMBL:EDO42047.1}; TaxID=45351 species="Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella.;" source="Nematostella vectensis (St
hypothetical protein
13_1_20cm_full_scaffold_30_7
unknown

Not on your lists

comp(5090..5284)
DNA (195bp) protein (65aa)

This feature has no annotations

13_1_20cm_full_scaffold_30_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(5346..6233)
DNA (888bp) protein (296aa)
Amidinotransferase n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=D2Z5E8_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
13_1_20cm_full_scaffold_30_9
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6308..7951
DNA (1644bp) protein (548aa)
Amidotransferase-related protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PGG0_9DELT rbh
Amidotransferase-related protein {ECO:0000313|EMBL:EPX63455.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" s
gatA2; amidase
13_1_20cm_full_scaffold_30_10
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(7932..8531)
DNA (600bp) protein (200aa)
DNA-3-methyladenine glycosylase I (EC:3.2.2.20); K01246 DNA-3-methyladenine glycosylase I [EC:3.2.2.20] Tax=CSP1_5_NC10
3-methyladenine-DNA glycosylase I n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I3V3_CALAS
tag; 3-methyladenine DNA glycosylase
13_1_20cm_full_scaffold_30_11
Oceanicola batsensis, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8609..9568
DNA (960bp) protein (320aa)
Quinone oxidoreductase n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U1B8_9RHOB
Quinone oxidoreductase {ECO:0000313|EMBL:EAQ02101.1}; TaxID=252305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola batsensis
NAD(P)H quinone oxidoreductase, PIG3 family
13_1_20cm_full_scaffold_30_12
Tatlockia micdadei, Tatlockia, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9627..10751
DNA (1125bp) protein (375aa)
Putative uncharacterized protein n=1 Tax=Burkholderia sp. (strain 383) RepID=Q39N69_BURS3
conserved protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CEG59969.1}; TaxID=451 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Tatlockia.;" source="Tatlockia micdadei (Legione
13_1_20cm_full_scaffold_30_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

10824..11600
DNA (777bp) protein (259aa)
hypothetical protein; K00540 [EC:1.-.-.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
short-chain dehydrogenase/reductase SDR (EC:1.1.1.276)
short-chain dehydrogenase n=1 Tax=Mastigocladopsis repens RepID=UPI0002E22FF8
13_1_20cm_full_scaffold_30_14
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(11597..12595)
DNA (999bp) protein (333aa)
putative oxidoreductase; K00459 nitronate monooxygenase [EC:1.13.12.16] Tax=RBG_16_Acidobacteria_70_10_curated
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A858_GEMAT alias=16ft_combo_ws3_scaffold_3265_11 id=5224739 tax=16ft_combo_ws3 species=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes rbh
putative oxidoreductase
13_1_20cm_full_scaffold_30_15
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(12592..13050)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A859_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_20cm_full_scaffold_30_16
Oscillatoriales cyanobacterium JSC-12, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(13047..15053)
DNA (2007bp) protein (669aa)
hypothetical protein n=1 Tax=Leptolyngbya boryana RepID=UPI00035E4A6B
Dipeptidyl aminopeptidase/acylaminoacyl peptidase {ECO:0000313|EMBL:EKQ67231.1}; TaxID=864702 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales.;" source="Oscillatoriales cyanob
hypothetical protein
13_1_20cm_full_scaffold_30_17
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

15144..16502
DNA (1359bp) protein (453aa)
class III aminotransferase; K00837 [EC:2.6.1.-] Tax=GWA2_Elusimicrobia_69_24_curated
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PLU5_9DELT rbh
class III aminotransferase
13_1_20cm_full_scaffold_30_18
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

16507..18093
DNA (1587bp) protein (529aa)
aldH; aldehyde dehydrogenase (EC:1.2.1.-); K00294 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.1.12] Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
aldH; aldehyde dehydrogenase (EC:1.2.1.-)
1-pyrroline-5-carboxylate dehydrogenase 1 n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q09DC3_STIAD rbh
13_1_20cm_full_scaffold_30_19
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

18090..19421
DNA (1332bp) protein (444aa)
4-aminobutyrate aminotransferase; K00823 4-aminobutyrate aminotransferase [EC:2.6.1.19] Tax=GWA2_Elusimicrobia_69_24_curated
Acetylornithine aminotransferase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QQ64_9DELT rbh
4-aminobutyrate aminotransferase
13_1_20cm_full_scaffold_30_20
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

19438..21339
DNA (1902bp) protein (634aa)
Antibiotic hydrolase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CCH0_9PLAN rbh
Antibiotic hydrolase {ECO:0000313|EMBL:EDL57615.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
hydrolase, CocE/NonD family
13_1_20cm_full_scaffold_30_21
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

Not on your lists

21367..22254
DNA (888bp) protein (296aa)
3-oxoadipate:succinyl-CoA transferase subunit A; K01039 glutaconate CoA-transferase, subunit A [EC:2.8.3.12] Tax=RBG_16_Elusimicrobia_66_12_curated
3-oxoadipate:succinyl-CoA transferase, A subunit n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CED9_MYXFH
3-oxoadipate:succinyl-CoA transferase subunit A
13_1_20cm_full_scaffold_30_22
CG_Elusi_04, Elusimicrobia, Bacteria

Not on your lists

22280..23020
DNA (741bp) protein (247aa)
3-oxoadipate CoA-transferase subunit B protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2U689_9DELT
3-oxoacid CoA-transferase Tax=CG_Elusi_04
3-oxoacid CoA-transferase
13_1_20cm_full_scaffold_30_23
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

23017..24744
DNA (1728bp) protein (576aa)
hypothetical protein n=1 Tax=Legionella tunisiensis RepID=UPI000363D56C
secreted protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
conserved protein of unknown function
13_1_20cm_full_scaffold_30_24
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24723..27269
DNA (2547bp) protein (849aa)
Secreted protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJ81_9GAMM
periplasmic component of the Tol biopolymer transport system Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
periplasmic component of the Tol biopolymer transport system
13_1_20cm_full_scaffold_30_25
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

27398..28558
DNA (1161bp) protein (387aa)
Cellulose biosynthesis (CelD)-like protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HDL7_ANADF
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
cellulose biosynthesis (CelD)-like protein
13_1_20cm_full_scaffold_30_26
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(28568..30268)
DNA (1701bp) protein (567aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA78_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_full_scaffold_30_27
Clostridia bacterium enrichment culture clone BF, Clostridia, Firmicutes, Bacteria

Not on your lists

30346..31914
DNA (1569bp) protein (523aa)
Putative benzoate-CoA ligase BzlA (Fragment) n=1 Tax=Clostridia bacterium enrichment culture clone BF RepID=D8WWP9_9FIRM
Putative benzoate-CoA ligase BzlA {ECO:0000313|EMBL:ADJ94003.1}; Flags: Fragment;; TaxID=857391 species="Bacteria; Firmicutes; Clostridia; environmental samples.;" source="Clostridia bacterium enrichm
benzoate-CoA ligase family
13_1_20cm_full_scaffold_30_28
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(32016..32774)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4S4_SALRM
Abortive infection protein
Abortive infection protein {ECO:0000313|EMBL:AHG91541.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_full_scaffold_30_29
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

32842..34029
DNA (1188bp) protein (396aa)
D-aminopeptidase n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FLH6_STIAD
aminopeptidase DmpA Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
peptidase S58 DmpA
13_1_20cm_full_scaffold_30_30
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

34029..35399
DNA (1371bp) protein (457aa)
Amino acid permease-associated region n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01X73_SOLUE
amino acid transporter Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
amino acid permease
Displaying items 1-30 of 31 in total

View Taxonomy