ggKbase home page

13_1_20cm_full_scaffold_3121

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_3121_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(1..390)
DNA (390bp) protein (130aa)
ABC transporter permease n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00037E3360
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
ABC transporter permease
13_1_20cm_full_scaffold_3121_2
bacterium YEK0313, Bacteria

Not on your lists

comp(387..1283)
DNA (897bp) protein (299aa)
Inner-membrane translocator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIJ7_9BURK
High-affinity branched-chain amino acid transport system permease protein LivH {ECO:0000313|EMBL:CEJ15315.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
branched chain amino acid ABC transporter permease
13_1_20cm_full_scaffold_3121_3
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1460..2068)
DNA (609bp) protein (203aa)
Substrate-binding protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0FZE2_9BRAD
substrate-binding protein
Substrate-binding protein {ECO:0000313|EMBL:BAL73879.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium s
13_1_20cm_full_scaffold_3121_4
unknown

Not on your lists

2519..2647
DNA (129bp) protein (43aa)

This feature has no annotations

13_1_20cm_full_scaffold_3121_5
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2688..3068)
DNA (381bp) protein (127aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JEY8_9ARCH
hypothetical protein Tax=RBG_16_Deltaproteobacteria_42_7_curated
hypothetical protein
13_1_20cm_full_scaffold_3121_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3134..3850)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PFL6_9BRAD
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
branched-chain amino acid transport system ATP-binding protein
13_1_20cm_full_scaffold_3121_7
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3843..4595)
DNA (753bp) protein (251aa)
Putative branched-chain amino acid transport system ATP-binding protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ALP0_AZOBR
amino acid ABC transporter ATP-binding protein
Amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:AIB11640.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" sou
13_1_20cm_full_scaffold_3121_8
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4731..5138
DNA (408bp) protein (136aa)
hisL; phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000255|HAMAP-Rule:MF_01021}; Short=PRA-CH {ECO:0000255|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000255|HAMAP-Rule:MF_01021};; TaxID=414684 species="Bacteria; Pr
Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=HIS3_RHOCS
13_1_20cm_full_scaffold_3121_9
unknown

Not on your lists

comp(5148..5609)
DNA (462bp) protein (154aa)

This feature has no annotations

13_1_20cm_full_scaffold_3121_10
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5786..6622)
DNA (837bp) protein (279aa)
Putative uncharacterized protein n=2 Tax=Nitrosococcus oceani RepID=Q3JAS5_NITOC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ28436.1}; TaxID=105559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni
13_1_20cm_full_scaffold_3121_11
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6619..7044)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AQB5_AZOBR
conserved membrane protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CCC99626.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum b
13_1_20cm_full_scaffold_3121_12
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7044..7679)
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Halomonas lutea RepID=UPI00036879E0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBS90087.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum li
13_1_20cm_full_scaffold_3121_13
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

7860..8258
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EHQ4_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF84216.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source
hypothetical protein
13_1_20cm_full_scaffold_3121_14
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8464..8595)
DNA (132bp) protein (44aa)
glutamate--cysteine ligase; K01919 glutamate--cysteine ligase [EC:6.3.2.2]
Glutamate--cysteine ligase n=2 Tax=Rhodospirillum rubrum RepID=G2T9M8_RHORU
Glutamate--cysteine ligase {ECO:0000313|EMBL:ABC21374.1}; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospiri
Displaying 14 items

View Taxonomy