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13_1_20cm_full_scaffold_3228

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_3228_1

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comp(133..438)
DNA (306bp) protein (102aa)
GTP-binding protein, ribosome biogenesis, YsxC (Fragment) n=1 Tax=mine drainage metagenome RepID=T1A375_9ZZZZ
GTP-binding protein, ribosome biogenesis, YsxC {ECO:0000313|EMBL:EQD36280.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine draina
13_1_20cm_full_scaffold_3228_2
Solemya velum gill symbiont, Gammaproteobacteria, Proteobacteria, Bacteria

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755..1471
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI000381730F
Cytochrome c553 {ECO:0000313|EMBL:KHF25242.1}; TaxID=2340 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="Solemya velum gill symbiont.;"
cytochrome c553
13_1_20cm_full_scaffold_3228_3

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1486..2394
DNA (909bp) protein (303aa)
dsbA; thiol:disulfide interchange protein DsbA (EC:5.3.4.1)
DSBA oxidoreductase (Fragment) n=1 Tax=mine drainage metagenome RepID=T1CCI4_9ZZZZ
DSBA oxidoreductase {ECO:0000313|EMBL:EQD63499.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
13_1_20cm_full_scaffold_3228_trna_1
unknown

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comp(2488..2561)
DNA (74bp)
transferRNA
13_1_20cm_full_scaffold_3228_4
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2645..2812)
DNA (168bp) protein (56aa)
hypothetical protein
id=14431409 Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
13_1_20cm_full_scaffold_3228_5
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2919..3278)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-604-O16 RepID=UPI0003791533
uncharacterized LOC100208015 Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
13_1_20cm_full_scaffold_3228_6

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3766..4302
DNA (537bp) protein (179aa)
Cytochrome c, class I (Fragment) n=1 Tax=mine drainage metagenome RepID=T1B1T3_9ZZZZ
Cytochrome c, class I {ECO:0000313|EMBL:EQD46844.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
cytochrome c class I
13_1_20cm_full_scaffold_3228_7
unknown

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4470..4901
DNA (432bp) protein (144aa)

This feature has no annotations

13_1_20cm_full_scaffold_3228_8
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4852..6423)
DNA (1572bp) protein (524aa)
Fis family transcriptional regulator n=1 Tax=Lamprocystis purpurea RepID=UPI0003717201
Competence protein ComM {ECO:0000313|EMBL:EXI88009.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
Mg chelatase-like protein
13_1_20cm_full_scaffold_3228_9

Not on your lists

comp(6462..6755)
DNA (294bp) protein (98aa)
Protein containing DUF526 n=1 Tax=mine drainage metagenome RepID=T1AW70_9ZZZZ
Protein containing DUF526 {ECO:0000313|EMBL:EQD64871.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
13_1_20cm_full_scaffold_3228_10

Not on your lists

7003..7251
DNA (249bp) protein (83aa)
Ammonium transporter (Fragment) n=1 Tax=mine drainage metagenome RepID=T1C0A5_9ZZZZ
Ammonium transporter {ECO:0000313|EMBL:EQD78911.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
ammonium transporter AmtB
13_1_20cm_full_scaffold_3228_11
RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7583..7780)
DNA (198bp) protein (66aa)
Uncharacterized protein Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated
13_1_20cm_full_scaffold_3228_12
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7895..8365
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003787F26
ammonium transporter transmembrane protein; K03320 ammonium transporter, Amt family Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
ammonium transporter AmtB
13_1_20cm_full_scaffold_3228_13
Marinobacter adhaerens, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8521..9075
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Marinobacter adhaerens (strain HP15) RepID=E4PNH6_MARAH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADP96294.1}; TaxID=225937 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter adha
13_1_20cm_full_scaffold_3228_14

Not on your lists

9242..10111
DNA (870bp) protein (290aa)
6-phosphogluconate dehydrogenase NAD-binding protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T0Z071_9ZZZZ
6-phosphogluconate dehydrogenase NAD-binding protein {ECO:0000313|EMBL:EQD41356.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine
Gfo/Idh/MocA family oxidoreductase
13_1_20cm_full_scaffold_3228_15
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10108..11193
DNA (1086bp) protein (362aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00037EAF7D
sensory transduction protein kinase AlgZ
Tax=BJP_IG2102_Gammaproteobacteria_62_140
13_1_20cm_full_scaffold_3228_16
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11202..11948
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI0003732788
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ACL71135.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source
13_1_20cm_full_scaffold_3228_17
Algoriphagus machipongonensis, Algoriphagus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

12066..12839
DNA (774bp) protein (258aa)
Putative HupC/HyaC/HydC family protein n=1 Tax=Algoriphagus machipongonensis RepID=A3HYQ3_9BACT
Putative HupC/HyaC/HydC family protein {ECO:0000313|EMBL:EAZ80389.1}; TaxID=388413 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Algoriphagus.;" source="Algoriphagus m
thiosulfate reductase cytochrome subunit B (membrane anchoring protein)-like protein
13_1_20cm_full_scaffold_3228_18
Algoriphagus machipongonensis, Algoriphagus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

12836..13606
DNA (771bp) protein (257aa)
Oxidoreductase, molybdopterin-binding n=1 Tax=Algoriphagus machipongonensis RepID=A3HYQ4_9BACT
Oxidoreductase, molybdopterin-binding {ECO:0000313|EMBL:EAZ80390.1}; TaxID=388413 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Algoriphagus.;" source="Algoriphagus ma
molybdopterin binding oxidoreductase
Displaying 19 items

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