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13_1_20cm_full_scaffold_33

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Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_33_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

1..285
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D129_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20041.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_1_20cm_full_scaffold_33_2
Bacillus bataviensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

309..1055
DNA (747bp) protein (249aa)
Short chain dehydrogenase n=1 Tax=Bacillus bataviensis LMG 21833 RepID=K6D3G0_9BACI
Short chain dehydrogenase {ECO:0000313|EMBL:EKN62573.1}; TaxID=1117379 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus bataviensis LMG 21833.;"
short-chain dehydrogenase
13_1_20cm_full_scaffold_33_3

Not on your lists

comp(1116..1451)
DNA (336bp) protein (112aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium 2303 RepID=B8R912_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:ACF98168.1}; TaxID=548900 species="Bacteria; environmental samples.;" source="uncultured bacterium 2303.;"
13_1_20cm_full_scaffold_33_4
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(1500..2096)
DNA (597bp) protein (199aa)
acetyltransferase; K03790 ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128] Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
GCN5-related N-acetyltransferase domain protein n=1 Tax=mine drainage metagenome RepID=T0YAU6_9ZZZZ
GCN5-related N-acetyltransferase
13_1_20cm_full_scaffold_33_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2139..2894
DNA (756bp) protein (252aa)
oxidoreductase FAD/NAD(P)-binding domain-containing protein; K00528 ferredoxin--NADP+ reductase [EC:1.18.1.2] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Oxidoreductase FAD/NAD(P)-binding domain protein n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GPY9_THISH
oxidoreductase FAD/NAD(P)-binding domain-containing protein
13_1_20cm_full_scaffold_33_6
Methylophilaceae bacterium 11, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3012..3500)
DNA (489bp) protein (163aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1101195 species="Bacteria; Proteobacteria; Betapr
peptidyl-prolyl isomerase (EC:5.2.1.8)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI0003770B5A
13_1_20cm_full_scaffold_33_7
Chromobacterium piscinae, Chromobacterium, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3666..5426
DNA (1761bp) protein (587aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036E1B42
Uncharacterized protein {ECO:0000313|EMBL:KIA80346.1}; TaxID=686831 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium.;" source="Chromobacterium
hypothetical protein
13_1_20cm_full_scaffold_33_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5460..6266)
DNA (807bp) protein (269aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI000379CEA7
tolA; hypothetical protein; K03646 colicin import membrane protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
hypothetical protein
13_1_20cm_full_scaffold_33_9
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6273..6677)
DNA (405bp) protein (135aa)
Protein TolR n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AF68_9PROT
protein TolR Tax=CG_Beta_01
protein TolR
13_1_20cm_full_scaffold_33_10
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6699..7367)
DNA (669bp) protein (223aa)
protein tolQ n=1 Tax=Thiobacillus thioparus RepID=UPI0003721D4E
MotA/TolQ/ExbB proton channel family protein
MotA/TolQ/ExbB proton channel family {ECO:0000313|EMBL:AAZ98162.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="T
13_1_20cm_full_scaffold_33_11
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7426..8457)
DNA (1032bp) protein (344aa)
Holliday junction ATP-dependent DNA helicase ruvB; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Burkholderia phymatum (strain DSM 17167 / STM815) RepID=B2JGU5_BURP8 rbh
ruvB; Holliday junction DNA helicase RuvB
13_1_20cm_full_scaffold_33_12
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8465..9046)
DNA (582bp) protein (194aa)
ruvA; Holliday junction DNA helicase RuvA; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
ruvA; holliday junction DNA helicase RuvA (EC:3.6.1.-)
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=RUVA_JANMA
13_1_20cm_full_scaffold_33_13
Ferriphaselus amnicola, Ferriphaselus, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9043..9570)
DNA (528bp) protein (176aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CMR6_SIDLE
13_1_20cm_full_scaffold_33_14
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9602..10330)
DNA (729bp) protein (243aa)
Probable transcriptional regulatory protein Nmul_A2722 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Y2722_NITMU rbh
hypothetical protein
Probable transcriptional regulatory protein Nmul_A2722 {ECO:0000255|HAMAP-Rule:MF_00693}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitro
13_1_20cm_full_scaffold_33_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10388..11023)
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000363AC15
peptidase S16; K07157 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
peptidase S16, lon domain-containing protein
13_1_20cm_full_scaffold_33_16
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11053..11694)
DNA (642bp) protein (214aa)
Aromatic acid decarboxylase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AEZ1_9PROT
Aromatic acid decarboxylase {ECO:0000313|EMBL:GAO35914.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella
aromatic acid decarboxylase
13_1_20cm_full_scaffold_33_17
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11782..12618)
DNA (837bp) protein (279aa)
UPF0042 nucleotide-binding protein Nmul_A0081 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Y081_NITMU rbh
hypothetical protein
Nucleotide-binding protein Nmul_A0081 {ECO:0000255|HAMAP-Rule:MF_00636}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source
13_1_20cm_full_scaffold_33_18
Laribacter hongkongensis, Laribacter, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12711..13670)
DNA (960bp) protein (320aa)
HPr kinase/phosphorylase (EC:2.7.11.-)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SA
hypothetical protein n=1 Tax=Chitiniphilus shinanonensis RepID=UPI00036AFB40 rbh
13_1_20cm_full_scaffold_33_19
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13667..14131)
DNA (465bp) protein (155aa)
ptsN; phosphotransferase system mannitol/fructose-specific IIA domain-containing protein (EC:2.7.1.69); K02806 PTS system, nitrogen regulatory IIA component [EC:2.7.1.69] Tax=RIFCSPLOWO2_02_FULL_Betap
PTS sugar transporter subunit IIA n=1 Tax=Azoarcus toluclasticus RepID=UPI00036769BC
PTS IIA-like nitrogen-regulatory protein PtsN
13_1_20cm_full_scaffold_33_20
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14244..14597)
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Chitiniphilus shinanonensis RepID=UPI000369BF5A
ribosomal subunit Interface protein; K05808 putative sigma-54 modulation protein Tax=RBG_16_Betaproteobacteria_58_11_curated
sigma 54 modulation protein/ribosomal protein s30ea
13_1_20cm_full_scaffold_33_21
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14670..16109)
DNA (1440bp) protein (480aa)
RNA polymerase factor sigma-54 (EC:2.7.7.6); K03092 RNA polymerase sigma-54 factor Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
RNA polymerase factor sigma-54 (EC:2.7.7.6)
RNA polymerase subunit sigma-54 n=1 Tax=Thiobacillus thioparus RepID=UPI0003749A25 rbh
13_1_20cm_full_scaffold_33_22
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16132..16866)
DNA (735bp) protein (245aa)
ABC transporter-like protein; K06861 lipopolysaccharide export system ATP-binding protein [EC:3.6.3.-] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
ATP-binding ABC transporter protein n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6YRM2_9RHOO rbh
ABC transporter
13_1_20cm_full_scaffold_33_23
RBG_16_Gallionellales_56_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16863..17525)
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003683388
lipopolysaccharide transport periplasmic protein LptA; K09774 lipopolysaccharide export system protein LptA Tax=RBG_16_Gallionellales_56_9_curated
OstA-like family protein
13_1_20cm_full_scaffold_33_24
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17530..18129)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B131_9PROT
hypothetical protein; K11719 lipopolysaccharide export system protein LptC Tax=RBG_16_Gallionellales_57_15_curated
hypothetical protein
13_1_20cm_full_scaffold_33_25
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18126..18656)
DNA (531bp) protein (177aa)
phosphatase KdsC; K03270 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] Tax=CG_Hydro_01
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase n=1 Tax=Methylotenera RepID=UPI000363FEC4
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
13_1_20cm_full_scaffold_33_26
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18676..19695)
DNA (1020bp) protein (340aa)
arabinose-5-phosphate isomerase (EC:5.3.1.13) Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
KpsF/GutQ family protein n=2 Tax=Pandoraea RepID=V5UFM6_9BURK rbh
arabinose 5-phosphate isomerase
13_1_20cm_full_scaffold_33_27
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19783..20688
DNA (906bp) protein (302aa)
Potassium efflux system protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6A9N3_9PROT
sodium/hydrogen exchanger; K03455 monovalent cation:H+ antiporter-2, CPA2 family Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
potassium efflux system protein
Displaying 27 items

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