ggKbase home page

13_1_20cm_full_scaffold_3854

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_3854_1
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

1..303
DNA (303bp) protein (101aa)
methionine-R-sulfoxide reductase (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NNH2_ROSCS
13_1_20cm_full_scaffold_3854_2
unknown

Not on your lists

comp(322..642)
DNA (321bp) protein (107aa)

This feature has no annotations

13_1_20cm_full_scaffold_3854_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(651..1262)
DNA (612bp) protein (204aa)
blue-light-activated protein (EC:2.7.13.3) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Sensor histidine kinase response regulator, Cache_1, HAMP, PAS, PAS and sensory_box domain-containing n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5EA05_GEOBB
Cache/HAMP/PAS/PAC domain-containing sensor histidine kinase response regulator
13_1_20cm_full_scaffold_3854_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1276..1773)
DNA (498bp) protein (166aa)
Two-component hybrid sensor and regulator n=2 Tax=Synechocystis sp. PCC 6803 RepID=Q6YS03_SYNY3
multi-sensor hybrid histidine kinase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
two-component hybrid sensor and regulator
13_1_20cm_full_scaffold_3854_5
unknown

Not on your lists

comp(1810..3930)
DNA (2121bp) protein (707aa)

This feature has no annotations

13_1_20cm_full_scaffold_3854_6
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(4045..4713)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I6X9_CALAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM01017.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 1
13_1_20cm_full_scaffold_3854_7
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(4653..6143)
DNA (1491bp) protein (497aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I6X9_CALAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM01017.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 1
13_1_20cm_full_scaffold_3854_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

6336..6893
DNA (558bp) protein (186aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_full_scaffold_3854_9
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6976..9297)
DNA (2322bp) protein (774aa)
Serine/threonine protein kinase n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LFQ2_9BACT
serine/threonine protein kinase Tax=RBG_16_Gammaproteobacteria_66_13_curated
protein kinase
13_1_20cm_full_scaffold_3854_10
Scedosporium apiospermum, Scedosporium, Microascales, Hypocreomycetidae, Ascomycota, Fungi

Not on your lists

comp(9366..10013)
DNA (648bp) protein (216aa)
GD17650 n=1 Tax=Drosophila simulans RepID=B4NT60_DROSI
Uncharacterized protein {ECO:0000313|EMBL:KEZ44217.1}; TaxID=563466 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Microascales; Microascaceae; Sce
hypothetical protein
13_1_20cm_full_scaffold_3854_11
unknown

Not on your lists

10354..10944
DNA (591bp) protein (197aa)

This feature has no annotations

13_1_20cm_full_scaffold_3854_12
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(11085..11306)
DNA (222bp) protein (74aa)
Uncharacterized protein {ECO:0000313|EMBL:KIJ73307.1}; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
13_1_20cm_full_scaffold_3854_13
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11310..12263)
DNA (954bp) protein (318aa)
Integral membrane protein TerC n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CHU0_THET1
integral membrane protein TerC
Integral membrane protein TerC {ECO:0000313|EMBL:AJE03972.1}; TaxID=345632 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pi
13_1_20cm_full_scaffold_3854_14
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12289..12951)
DNA (663bp) protein (221aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9Z0B5_9NEIS
peptide methionine sulfoxide reductase
13_1_20cm_full_scaffold_3854_15
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

14778..15617
DNA (840bp) protein (280aa)
ABC-type multidrug transport system, ATPase and permease component n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D976_SINAD
multidrug ABC transporter ATPase/permease
ABC-type multidrug transport system, ATPase and permease component {ECO:0000313|EMBL:AGA25939.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; S
13_1_20cm_full_scaffold_3854_16
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

15604..16914
DNA (1311bp) protein (437aa)
ABC-type multidrug transport system, ATPase and permease component n=2 Tax=Singulisphaera acidiphila RepID=L0DAT4_SINAD
multidrug ABC transporter ATPase/permease
ABC-type multidrug transport system, ATPase and permease component {ECO:0000313|EMBL:AGA25938.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; S
Displaying 16 items

View Taxonomy