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13_1_20cm_full_scaffold_468

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_468_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1..423)
DNA (423bp) protein (141aa)
pyridoxal-5'-phosphate-dependent protein subunit beta (EC:2.5.1.47); K01738 cysteine synthase A [EC:2.5.1.47] Tax=GWA2_Rokubacteria_73_35_curated
Cysteine synthase n=1 Tax=Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) RepID=Q0AWJ8_SYNWW
O-acetylserine (thiol)-lyase
13_1_20cm_full_scaffold_468_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(486..866)
DNA (381bp) protein (127aa)
UPF0102 protein BN4_11692 n=1 Tax=Desulfovibrio piezophilus (strain DSM 21447 / JCM 15486 / C1TLV30) RepID=M1WSK1_DESPC
hypothetical protein; K07460 putative endonuclease Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_20cm_full_scaffold_468_3
Vibrio sp. JCM 19236, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(920..2374)
DNA (1455bp) protein (485aa)
hypothetical protein n=1 Tax=Aliivibrio logei RepID=UPI0002E94BBE
Exported zinc metalloprotease yfgC {ECO:0000313|EMBL:GAM68863.1}; TaxID=1481926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio sp. JCM 1923
peptidase
13_1_20cm_full_scaffold_468_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2378..3022)
DNA (645bp) protein (215aa)
rnhB; ribonuclease HII (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] Tax=GWA2_Rokubacteria_73_35_curated
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E5S9_GEOLS
13_1_20cm_full_scaffold_468_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists


comp(3038..3421)
DNA (384bp) protein (128aa)
50S ribosomal protein L19 n=1 Tax=Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 / JW/IU-DC1) RepID=I4AC46_DESDJ
50S ribosomal protein L19 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
50S ribosomal protein L19
13_1_20cm_full_scaffold_468_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3399..4184)
DNA (786bp) protein (262aa)
tRNA (Guanine37-N(1)-) methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EZP6_9BACT
tRNA (Guanine37-N(1)-) methyltransferase
13_1_20cm_full_scaffold_468_7
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(4195..4719)
DNA (525bp) protein (175aa)
Ribosome maturation factor RimM n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HN73_9FIRM
16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
16S rRNA processing protein RimM
13_1_20cm_full_scaffold_468_8
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

Not on your lists

comp(4810..5040)
DNA (231bp) protein (77aa)
UPF0109 protein NITGR_380022 n=1 Tax=Nitrospina gracilis 3/211 RepID=M1ZC03_9BACT
UPF0109 protein NITGR_380022 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=1266370 species="Bacteria; Nitrospinae; Nitrospinia; Nitrospinales; Nitrospinaceae; Nitrospina.;" source="Nitrospina gracilis (str
hypothetical protein
13_1_20cm_full_scaffold_468_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists


comp(5086..5334)
DNA (249bp) protein (83aa)
30S ribosomal protein S16 n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R888_AMMDK
rpsP; 30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
30S ribosomal protein S16
13_1_20cm_full_scaffold_468_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists


comp(5339..6685)
DNA (1347bp) protein (449aa)
Signal recognition particle protein n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SJE2_THEM7 rbh
signal recognition particle subunit FFH/SRP54 (srp54); K03106 signal recognition particle subunit SRP54 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
signal recognition particle subunit FFH/SRP54 (srp54)
13_1_20cm_full_scaffold_468_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(6738..7406)
DNA (669bp) protein (223aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1); K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] Tax=GWA2_Rokubacteria_73_35_curated
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=2 Tax=Brevibacillus laterosporus RepID=F7TX26_BRELA
13_1_20cm_full_scaffold_468_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7434..8627)
DNA (1194bp) protein (398aa)
hypothetical protein; K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67PQ9_SYMTH
hypothetical protein
13_1_20cm_full_scaffold_468_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8631..8798)
DNA (168bp) protein (56aa)
hypothetical protein; K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_20cm_full_scaffold_468_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(8795..9634)
DNA (840bp) protein (280aa)
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9); K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Methionyl-tRNA formyltransferase n=2 Tax=Geobacter metallireducens RepID=FMT_GEOMG
fmt; methionyl-tRNA formyltransferase
13_1_20cm_full_scaffold_468_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(9720..10247)
DNA (528bp) protein (176aa)
peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Peptide deformylase n=1 Tax=Flexistipes sinusarabici (strain DSM 4947 / MAS 10) RepID=F8E5Y8_FLESM
peptide deformylase
13_1_20cm_full_scaffold_468_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(10235..10729)
DNA (495bp) protein (165aa)
primosomal protein N; K04066 primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Primosomal protein N n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EGP8_9CHLR
primosomal protein N'
Displaying 16 items

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