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13_1_20cm_full_scaffold_4763

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_4763_1

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1..390
DNA (390bp) protein (130aa)
Smr protein/MutS2 (Fragment) n=1 Tax=mine drainage metagenome RepID=T1CBH3_9ZZZZ
Smr protein/MutS2 {ECO:0000313|EMBL:EQD78653.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Smr protein/MutS2
13_1_20cm_full_scaffold_4763_2

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comp(394..1458)
DNA (1065bp) protein (355aa)
tRNA pseudouridine synthase D TruD (Fragment) n=1 Tax=mine drainage metagenome RepID=T0ZQH4_9ZZZZ
tRNA pseudouridine synthase D TruD {ECO:0000313|EMBL:EQD50556.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenom
tRNA pseudouridine synthase D
13_1_20cm_full_scaffold_4763_3
Xylella fastidiosa, Xylella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1509..1982)
DNA (474bp) protein (158aa)
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Xylella fastidiosa RepID=UPI000160258C
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000255|HAMAP-Rule:MF_00107}; Short=MECDP-synthase {ECO:0000255|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000255|HAMAP-Rule:MF_00107}
13_1_20cm_full_scaffold_4763_4

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comp(2020..2346)
DNA (327bp) protein (109aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (Fragment) n=1 Tax=mine drainage metagenome RepID=T0YV10_9ZZZZ
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000313|EMBL:EQD36858.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="m
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
13_1_20cm_full_scaffold_4763_5

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comp(2319..2690)
DNA (372bp) protein (124aa)
4-diphosphocytidyl-2C-methyl-D-erythritol synthase domain protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T1BTM9_9ZZZZ
4-diphosphocytidyl-2C-methyl-D-erythritol synthase domain protein {ECO:0000313|EMBL:EQD57310.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;"
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
13_1_20cm_full_scaffold_4763_6
Teredinibacter turnerae, Teredinibacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2735..3055)
DNA (321bp) protein (107aa)
Cell division protein FtsB n=1 Tax=Teredinibacter turnerae (strain ATCC 39867 / T7901) RepID=FTSB_TERTT
cell division protein FtsB
Cell division protein FtsB {ECO:0000255|HAMAP-Rule:MF_00599}; TaxID=377629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadales genera incertae sedis; Teredinibacte
13_1_20cm_full_scaffold_4763_7
Ralstonia syzygii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3071..4369)
DNA (1299bp) protein (433aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
eno; enolase, phosphopyruvate hydratase (EC:4.2.1.11)
Enolase n=1 Tax=Ralstonia syzygii R24 RepID=G3A6G8_9RALS
13_1_20cm_full_scaffold_4763_8
Thiorhodococcus sp. AK35, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4366..5199)
DNA (834bp) protein (278aa)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-man
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YFN7_THIV6
3-deoxy-7-phosphoheptulonate synthase
13_1_20cm_full_scaffold_4763_9
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5253..6926)
DNA (1674bp) protein (558aa)
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase {ECO:0000255|HAMAP-Rule:MF_01227}; EC=6.3.4.2 {ECO:0000255|HAMAP-Rule:MF_01227};; CTP synthetase {ECO:0000255|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000255|HAMAP-Rule:MF_01227};
CTP synthase n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=PYRG_ALKEH rbh
13_1_20cm_full_scaffold_4763_10

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comp(7014..7220)
DNA (207bp) protein (69aa)
Lysidine-tRNA(Ile) synthetase, substrate-binding domain protein {ECO:0000313|EMBL:EQD27695.1}; EC=6.1.1.- {ECO:0000313|EMBL:EQD27695.1};; TaxID=410659 species="unclassified sequences; metagenomes; eco
tilS; tRNA(Ile)-lysidine synthase (EC:6.3.4.-); K04075 tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
Lysidine-tRNA(Ile) synthetase, substrate-binding domain protein n=1 Tax=mine drainage metagenome RepID=T0ZD16_9ZZZZ
13_1_20cm_full_scaffold_4763_11
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8372..9337)
DNA (966bp) protein (322aa)
accA; acetyl-CoA carboxylase, carboxyl transferase subunit alpha (EC:6.4.1.2)
acetyl-CoA carboxylase subunit alpha n=1 Tax=Methylococcus capsulatus RepID=UPI0002D4676D rbh
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00823}; Short=ACCase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyl
13_1_20cm_full_scaffold_4763_12
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9353..12595)
DNA (3243bp) protein (1081aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Cand
DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III, alpha subunit n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GQ67_THISH rbh
Displaying 12 items

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