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13_1_20cm_full_scaffold_4784

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_4784_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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2..829
DNA (828bp) protein (276aa)
UPF0747 protein n=2 Tax=Bacteria RepID=E7C456_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_full_scaffold_4784_2
uncultured actinobacterium HF0500_01C15, Actinobacteria, Actinobacteria, Bacteria

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839..1120
DNA (282bp) protein (94aa)
Putative uncharacterized protein n=2 Tax=Bacteria RepID=E7C455_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:ADI22314.1}; TaxID=723603 species="Bacteria; Actinobacteria; marine Actinobacteria clade; environmental samples.;" source="uncultured actinobacterium
13_1_20cm_full_scaffold_4784_3
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1123..2718
DNA (1596bp) protein (532aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S9_GEMAT
hypothetical protein
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca
13_1_20cm_full_scaffold_4784_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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2685..4499
DNA (1815bp) protein (605aa)
UvrABC system protein C n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=UVRC_GEMAT
uvrC; UvrABC system protein C; K03703 excinuclease ABC subunit C Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
UvrABC system protein C
13_1_20cm_full_scaffold_4784_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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4486..5658
DNA (1173bp) protein (391aa)
threonine synthase; K01733 threonine synthase [EC:4.2.3.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative threonine synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8T1_GEMAT
Pyridoxal-5'-phosphate-dependent protein beta subunit
13_1_20cm_full_scaffold_4784_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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5688..6872
DNA (1185bp) protein (395aa)
UPF0272 protein Moth_2512 n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Y2512_MOOTA alias=16ft_combo_ws3_scaffold_1020_42 id=5223158 tax=16ft_combo_ws3 species=Moorella thermoacetica (strain ATCC 39073) genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes
TIGR00299 family protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
UPF0272 protein
13_1_20cm_full_scaffold_4784_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

6875..8386
DNA (1512bp) protein (504aa)
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_20cm_full_scaffold_4784_trna_1
unknown

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8529..8600
DNA (72bp)
transferRNA
13_1_20cm_full_scaffold_4784_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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8871..9530
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI0003618488
Beta-glucanase/beta-glucan synthetase {ECO:0000313|EMBL:CDM64380.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.
glycoside hydrolase family protein
13_1_20cm_full_scaffold_4784_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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9484..10062
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000360D737
RNA polymerase sigma-70 factor
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:AHG89921.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_full_scaffold_4784_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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10090..11097
DNA (1008bp) protein (336aa)
Anti-FecI sigma factor, FecR n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MHL0_RHOM4
FecR protein
FecR protein {ECO:0000313|EMBL:AHG89922.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_full_scaffold_4784_11
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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11114..14536
DNA (3423bp) protein (1141aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00036D12FC rbh
TonB-dependent receptor plug {ECO:0000313|EMBL:CCH52058.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
TonB-dependent receptor plug
13_1_20cm_full_scaffold_4784_12
unknown

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14557..14667
DNA (111bp) protein (37aa)

This feature has no annotations

Displaying 13 items

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