ggKbase home page

13_1_20cm_full_scaffold_5089

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_5089_1
Thiobacillus prosperus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..380)
DNA (378bp) protein (126aa)
ABC transporter permease protein n=1 Tax=Caldisericum exile (strain DSM 21853 / NBRC 104410 / AZM16c01) RepID=I0GLD1_CALEA
PotC, ABC-type spermidine/putrescine transport system, permease component II {ECO:0000313|EMBL:KFZ90028.1}; TaxID=160660 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus
ABC transporter permease
13_1_20cm_full_scaffold_5089_2
Thioclava sp. DT23-4, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(377..1174)
DNA (798bp) protein (266aa)
acriflavin resistance protein n=1 Tax=Thiothrix disciformis RepID=UPI00037B9B6F
Acriflavin resistance protein {ECO:0000313|EMBL:KEO58602.1}; TaxID=1353528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava sp.
ABC transporter permease
13_1_20cm_full_scaffold_5089_3
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(1292..2467)
DNA (1176bp) protein (392aa)
Integrase catalytic region n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BIY4_MEISD rbh
Integrase catalytic region
Integrase catalytic region {ECO:0000313|EMBL:ADH65140.1}; Flags: Precursor;; TaxID=526227 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus
13_1_20cm_full_scaffold_5089_4
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

Not on your lists

2551..3480
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RI52_9FIRM
phosphotransferase domain-containing protein; K07053 Tax=RBG_16_Bathyarchaeota_57_9_curated
PHP domain-containing protein
13_1_20cm_full_scaffold_5089_5
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3471..5030
DNA (1560bp) protein (520aa)
glycerol-3-phosphate dehydrogenase n=1 Tax=Nocardiopsis halophila RepID=UPI000346A86A rbh
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:AHH96168.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
13_1_20cm_full_scaffold_5089_6
Streptomyces vietnamensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4969..5748)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Streptomyces scabies (strain 87.22) RepID=C9YXB3_STRSW
5,10-methylenetetrahydrofolate reductase
5,10-methylenetetrahydrofolate reductase {ECO:0000313|EMBL:AJF69066.1}; TaxID=362257 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces vietna
13_1_20cm_full_scaffold_5089_7
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5807..7018)
DNA (1212bp) protein (404aa)
glycine cleavage system protein T n=1 Tax=Nocardiopsis chromatogenes RepID=UPI0003498966 rbh
Glycine cleavage system T protein (aminomethyltransferase)
Glycine cleavage system T protein (Aminomethyltransferase) {ECO:0000313|EMBL:AHY45912.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacterac
13_1_20cm_full_scaffold_5089_8
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7029..8459)
DNA (1431bp) protein (477aa)
nonphosphorylating glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.9)
Nonphosphorylating glyceraldehyde-3-phosphate dehydrogenase {ECO:0000313|EMBL:ABG03727.1}; EC=1.2.1.9 {ECO:0000313|EMBL:ABG03727.1};; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rub
Nonphosphorylating glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AY01_RUBXD rbh
13_1_20cm_full_scaffold_5089_9
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8483..9655)
DNA (1173bp) protein (391aa)
alcohol dehydrogenase n=1 Tax=Alicyclobacillus pohliae RepID=UPI00037359CB
Alcohol dehydrogenase class IV
Alcohol dehydrogenase class IV {ECO:0000313|EMBL:AHY45919.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="
13_1_20cm_full_scaffold_5089_10
Streptomyces roseochromogenus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9691..9993)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Streptomyces roseochromogenes subsp. oscitans DS 12.976 RepID=V6L6I8_STRRC
Uncharacterized protein {ECO:0000313|EMBL:EST36824.1}; TaxID=1352936 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces roseochromogenus subsp
hypothetical protein
13_1_20cm_full_scaffold_5089_11
Streptomyces collinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10061..10912)
DNA (852bp) protein (284aa)
Glycine betaine-binding lipoprotein n=1 Tax=Streptomyces collinus Tu 365 RepID=S5V008_STRCU
glycine betaine-binding lipoprotein
Glycine betaine-binding lipoprotein {ECO:0000313|EMBL:AGS71346.1}; TaxID=1214242 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces collinus T
13_1_20cm_full_scaffold_5089_12
Streptomyces albus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11033..11698)
DNA (666bp) protein (222aa)
glycine/betaine ABC transporter permease n=1 Tax=Streptomyces sp. LaPpAH-108 RepID=UPI000366398D
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:AJE83434.1}; TaxID=1888 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albus.;"
Displaying 12 items

View Taxonomy