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13_1_20cm_full_scaffold_54

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Displaying items 1-30 of 45 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_54_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

60..392
DNA (333bp) protein (111aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01WK5_SOLUE
peptidase M14 carboxypeptidase A
Peptidase M14 carboxypeptidase A {ECO:0000313|EMBL:AHG89233.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_full_scaffold_54_2
unknown

Not on your lists

comp(554..757)
DNA (204bp) protein (68aa)

This feature has no annotations

13_1_20cm_full_scaffold_54_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

1285..1632
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L022_THERP
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_full_scaffold_54_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1636..3624)
DNA (1989bp) protein (663aa)
leuC2; 3-isopropylmalate dehydratase (EC:4.2.1.33); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YC07_SORCE
hypothetical protein
13_1_20cm_full_scaffold_54_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

3635..5266
DNA (1632bp) protein (544aa)
Peptidase M28 n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QCN4_9CYAN
Predicted aminopeptidase {ECO:0000313|EMBL:CDM65305.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
peptidase M28
13_1_20cm_full_scaffold_54_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

5462..6562
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAL5_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_20cm_full_scaffold_54_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

6613..7281
DNA (669bp) protein (223aa)
Putative transcriptional regulator n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3AAZ9_CARHZ
transcriptional regulator TrmB Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
transcriptional regulator
13_1_20cm_full_scaffold_54_8
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

7221..8216
DNA (996bp) protein (332aa)
Putative BchO protein n=1 Tax=Nocardia asteroides NBRC 15531 RepID=U5EI26_NOCAS
alpha/beta hydrolase fold protein Tax=RBG_16_Chloroflexi_68_14_curated
hypothetical protein
13_1_20cm_full_scaffold_54_9
unknown

Not on your lists

8432..8851
DNA (420bp) protein (140aa)

This feature has no annotations

13_1_20cm_full_scaffold_54_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(8865..11402)
DNA (2538bp) protein (846aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A719_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88939.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_full_scaffold_54_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11534..13963)
DNA (2430bp) protein (810aa)
lon; ATP-dependent Lon protease (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Lon protease n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DKJ4_SINAD rbh
ATP-dependent protease La
13_1_20cm_full_scaffold_54_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

14212..16098
DNA (1887bp) protein (629aa)
putative serine/threonine protein kinase (EC:2.7.11.1); K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAM0_GEMAT
protein kinase
13_1_20cm_full_scaffold_54_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(16095..19184)
DNA (3090bp) protein (1030aa)
spermine synthase; K00797 spermidine synthase [EC:2.5.1.16] Tax=GWC2_Gemmatimonadetes_71_10_curated
Spermine/spermidine synthase family protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UB74_MYXSD alias=16ft_combo_ws3_scaffold_5011_39 id=5225169 tax=16ft_combo_ws3 species=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria
speE2; spermine/spermidine synthase family protein
13_1_20cm_full_scaffold_54_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(19174..21294)
DNA (2121bp) protein (707aa)
2-oxo acid dehydrogenase E1 component alpha/beta subunit; K11381 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] Tax=RBG_16_Gemmatimonadetes_66_8_curated
2-oxo acid dehydrogenase E1 component alpha/beta subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABG2_GEMAT
2-oxo acid dehydrogenase E1 component alpha/beta subunit
13_1_20cm_full_scaffold_54_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

21325..21807
DNA (483bp) protein (161aa)
Flavin reductase domain protein FMN-binding protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CEF4_THET1
flavin reductase domain-containing FMN-binding protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
flavin reductase domain-containing FMN-binding protein
13_1_20cm_full_scaffold_54_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(21804..23456)
DNA (1653bp) protein (551aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABG9_GEMAT
hypothetical protein; K07047 Tax=RBG_16_Gemmatimonadetes_66_8_curated
Amidohydrolase 3
13_1_20cm_full_scaffold_54_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(23466..23741)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABH3_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_full_scaffold_54_18
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(23780..24748)
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F366_CONWI
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_20cm_full_scaffold_54_19
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24828..25208
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KMX6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGL01915.1}; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum gibsoniae DSM
13_1_20cm_full_scaffold_54_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(25165..26091)
DNA (927bp) protein (309aa)
rsgA; putative ribosome biogenesis GTPase RsgA (EC:3.6.1.-); K06949 ribosome biogenesis GTPase [EC:3.6.1.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SHK3_RHOMR
ribosome biogenesis GTPase RsgA
13_1_20cm_full_scaffold_54_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(26091..26387)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABL7_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_full_scaffold_54_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(26417..27349)
DNA (933bp) protein (311aa)
Putative proline dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABL8_GEMAT
Proline dehydrogenase
Proline dehydrogenase {ECO:0000313|EMBL:AHG92070.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_full_scaffold_54_23
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(27377..29512)
DNA (2136bp) protein (712aa)
fadJ; multifunctional fatty acid oxidation complex subunit alpha; K01782 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] Tax=RIFCS
3-hydroxyacyl-CoA dehydrogenase NAD-binding n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UB30_ANASK
fadJ; multifunctional fatty acid oxidation complex subunit alpha
13_1_20cm_full_scaffold_54_24
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(29512..30777)
DNA (1266bp) protein (422aa)
fadI; acetyl-CoA acyltransferase (EC:2.3.1.16); K00632 acetyl-CoA acyltransferase [EC:2.3.1.16] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
fadI; acetyl-CoA acyltransferase (EC:2.3.1.16)
Acetyl-CoA acyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABM2_GEMAT
13_1_20cm_full_scaffold_54_25
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

30923..32551
DNA (1629bp) protein (543aa)
glpD; glycerol-3-phosphate dehydrogenase (EC:1.1.5.3); K00111 glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Glycerol-3-phosphate dehydrogenase n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CJP9_MYXFH rbh
glycerol-3-phosphate dehydrogenase
13_1_20cm_full_scaffold_54_26
Mumia flava, Mumia, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32566..33432
DNA (867bp) protein (289aa)
cytochrome C n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI000378DB68
class I cytochrome c
Cytochrome C {ECO:0000313|EMBL:KHK86588.1}; TaxID=1348852 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;"
13_1_20cm_full_scaffold_54_27
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

33466..34152
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PIZ7_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU60081.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source=
13_1_20cm_full_scaffold_54_28
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34202..34975)
DNA (774bp) protein (258aa)
Putative membrane protein n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C4U5_DESTA
hypothetical protein Tax=RBG_16_Desulfobacca_60_12_curated
hypothetical protein
13_1_20cm_full_scaffold_54_29
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(34966..35967)
DNA (1002bp) protein (334aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_20cm_full_scaffold_54_30
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35954..37042)
DNA (1089bp) protein (363aa)
D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Blr7451 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89DI8_BRADU
hypothetical protein
Displaying items 1-30 of 45 in total

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