ggKbase home page

13_1_20cm_full_scaffold_9642

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_9642_1
Methylotenera versatilis, Methylotenera, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..563)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Methylotenera sp. (strain 301) RepID=D7DPZ8_METS0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADI29369.1}; Flags: Precursor;; TaxID=666681 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylotenera.;" source
13_1_20cm_full_scaffold_9642_2
Methylotenera versatilis, Methylotenera, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(560..1390)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Methylotenera sp. (strain 301) RepID=D7DJ19_METS0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADI30054.1}; TaxID=666681 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylotenera.;" source="Methylotenera ver
13_1_20cm_full_scaffold_9642_3
BJP_08E140C01_Syntrophobacterales_43_19, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1387..1725)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036084FF
hypothetical protein
Tax=BJP_08E140C01_Syntrophobacterales_43_19
13_1_20cm_full_scaffold_9642_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1735..2616)
DNA (882bp) protein (294aa)
iaaA; isoaspartyl dipeptidase with L-asparaginase activity; K13051 beta-aspartyl-peptidase (threonine type) [EC:3.4.19.5] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
asparaginase (EC:3.5.1.1)
Asparaginase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJ40_RHOM4
13_1_20cm_full_scaffold_9642_5
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2604..3230)
DNA (627bp) protein (209aa)
Phosphoribosyltransferase n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RDC6_AMMDK
phosphoribosyltransferase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
phosphoribosyltransferase
13_1_20cm_full_scaffold_9642_6
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(3227..3826)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VLX7_POLNA
Uncharacterized protein {ECO:0000313|EMBL:KIF24165.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
hypothetical protein
13_1_20cm_full_scaffold_9642_7
Methylovulum miyakonense, Methylovulum, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3823..4158)
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI00037E1E5B
13_1_20cm_full_scaffold_9642_8
unknown

Not on your lists

comp(4160..4468)
DNA (309bp) protein (103aa)

This feature has no annotations

13_1_20cm_full_scaffold_9642_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4465..5169)
DNA (705bp) protein (235aa)
Branched-chain amino acid transport ATP-binding protein LivF n=1 Tax=Rhodovulum sp. PH10 RepID=J6UAW7_9RHOB
putative branched-chain amino acid ABC transporter, ATP-binding component (livF-like) Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
livF; leucine/isoleucine/valine transporter ATP-binding subunit
13_1_20cm_full_scaffold_9642_10
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5169..5894)
DNA (726bp) protein (242aa)
Putative branched-chain amino acid ABC transporter, ATP-binding component (LivG-like) n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZAN7_AZOL4 rbh
putative branched-chain amino acid ABC transporter, ATP-binding component (livG-like); K01995 branched-chain amino acid transport system ATP-binding protein Tax=RBG_16_Betaproteobacteria_66_20_curated
putative branched-chain amino acid ABC transporter, ATP-binding component (livG-like)
13_1_20cm_full_scaffold_9642_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5891..6856)
DNA (966bp) protein (322aa)
ABC-type branched-chain amino acid transport system, permease component n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W4G2_MAGSA
ABC-type branched-chain amino acid transport system, permease component Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
ABC-type branched-chain amino acid transport system, permease component
13_1_20cm_full_scaffold_9642_12
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6853..7722)
DNA (870bp) protein (290aa)
Branched-chain amino acid transport system permease protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P083_AZOS1 rbh
livH; branched-chain amino acid transport system permease protein; K01997 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
livH; branched-chain amino acid transport system permease protein
13_1_20cm_full_scaffold_9642_13
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7840..9063)
DNA (1224bp) protein (408aa)
Branched-chain amino acid transport system substrate-binding protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ARP0_AZOBR rbh
livK; branched-chain amino acid transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
branched-chain amino acid ABC transporter
13_1_20cm_full_scaffold_9642_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9101..10354
DNA (1254bp) protein (418aa)
fcs2; feruloyl-CoA synthase (EC:6.2.1.-); K12508 feruloyl-CoA synthase [EC:6.2.1.34] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
AMP-dependent synthetase and ligase n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07K03_RHOP5
feruloyl-CoA synthase
Displaying 14 items

View Taxonomy