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13_1_20cm_2_scaffold_1879

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_1879_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(1..531)
DNA (531bp) protein (177aa)
Transketolase, C-terminal subunit {ECO:0000313|EMBL:AFU60392.1}; EC=2.2.1.1 {ECO:0000313|EMBL:AFU60392.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrosos
tktB; transketolase, C-terminal subunit (EC:2.2.1.1)
Transketolase, C-terminal subunit n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IML5_NITGG
13_1_20cm_2_scaffold_1879_2
Candidatus Desulforudis audaxviator, Candidatus Desulforudis, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(581..1408)
DNA (828bp) protein (276aa)
Transketolase domain protein n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I6D6_DESAP
Transketolase domain protein {ECO:0000313|EMBL:ACA60567.1}; TaxID=477974 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Candidatus Desulforudis.;" source="Desulforudis audax
transketolase domain-containing protein
13_1_20cm_2_scaffold_1879_3
GWB2_Deltaproteobacteria_55_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1411..2436)
DNA (1026bp) protein (342aa)
rfaEa; d-beta-d-heptose 7-phosphate kinase (EC:2.7.1.-) Tax=GWB2_Deltaproteobacteria_55_19_curated
PfkB domain protein alias=gwe2_scaffold_8_231 id=2166669 tax=TA06 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown
PfkB domain-containing protein
13_1_20cm_2_scaffold_1879_4
RBG_16_Archaea_50_20_curated, Archaea

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2709..3932
DNA (1224bp) protein (408aa)
Putative acyl-CoA dehydrogenase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHB1_NITGG
acyl-CoA dehydrogenase Tax=RBG_16_Archaea_50_20_curated
putative acyl-CoA dehydrogenase
13_1_20cm_2_scaffold_1879_5
unknown

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4097..4519
DNA (423bp) protein (141aa)

This feature has no annotations

13_1_20cm_2_scaffold_1879_6
unknown

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4587..5108
DNA (522bp) protein (174aa)

This feature has no annotations

13_1_20cm_2_scaffold_1879_7
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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5238..6518
DNA (1281bp) protein (427aa)
FixC; dehydrogenases; K00313 electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-] Tax=RBG_16_Euryarchaeota_68_13_curated
Dehydrogenases n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D1D5_PELTS
FixC; dehydrogenases
13_1_20cm_2_scaffold_1879_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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6521..6814
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI0003722417
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; K03855 ferredoxin like protein Tax=RBG_16_Euryarchaeota_68_12_curated
4Fe-4S ferredoxin
13_1_20cm_2_scaffold_1879_9
unknown

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6884..7234
DNA (351bp) protein (117aa)

This feature has no annotations

13_1_20cm_2_scaffold_1879_10
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

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comp(7247..8230)
DNA (984bp) protein (328aa)
Electron transfer flavoprotein FAD-binding domain protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8EXB5_9DELT
electron transfer flavoprotein subunit alpha; K03522 electron transfer flavoprotein alpha subunit Tax=RBG_16_Planctomycetes_43_13_curated
electron transfer flavoprotein subunit alpha/beta
13_1_20cm_2_scaffold_1879_11
RLO_RIF03_38_15, RIF3, Bacteria

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comp(8234..8770)
DNA (537bp) protein (179aa)
Electron transfer flavoprotein subunit beta n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AKP2_IGNAJ alias=16ft_combo_ws3_scaffold_1380_13 id=5223689 tax=16ft_combo_ws3 species=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteria
electron transfer flavoprotein subunit beta Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
Electron transfer flavoprotein alpha/beta-subunit
13_1_20cm_2_scaffold_1879_12
RBG_16_Archaea_50_20_curated, Archaea

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9113..9397
DNA (285bp) protein (95aa)
Sec-independent protein translocase protein TatA n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N5D2_9ARCH
twin arginine-targeting protein translocase; K03116 sec-independent protein translocase protein TatA Tax=RBG_16_Archaea_50_20_curated
sec-independent protein translocase protein TatA
13_1_20cm_2_scaffold_1879_13
RBG_16_Archaea_50_20_curated, Archaea

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9551..10441
DNA (891bp) protein (297aa)
Sec-independent protein translocase protein TatC n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N5D1_9ARCH
Sec-independent protein secretion pathway component TatC; K03118 sec-independent protein translocase protein TatC Tax=RBG_16_Archaea_50_20_curated
sec-independent protein translocase protein TatC
13_1_20cm_2_scaffold_1879_14
Methanobacterium sp. Maddingley MBC34, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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10754..11176
DNA (423bp) protein (141aa)
Putative transcriptional regulator n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6T2B9_9EURY
Putative transcriptional regulator {ECO:0000313|EMBL:EKQ53378.1}; TaxID=1220534 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="M
hypothetical protein
13_1_20cm_2_scaffold_1879_15
unknown

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11580..11924
DNA (345bp) protein (115aa)

This feature has no annotations

13_1_20cm_2_scaffold_1879_16
RBG_16_Aminicenantes_66_30_curated, Aminicenantes, Bacteria

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11929..13365
DNA (1437bp) protein (479aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI00036B53FD rbh
hypothetical protein Tax=RBG_16_Aminicenantes_66_30_curated
hypothetical protein
13_1_20cm_2_scaffold_1879_17
unknown

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comp(13472..13690)
DNA (219bp) protein (73aa)

This feature has no annotations

13_1_20cm_2_scaffold_1879_18
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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13736..14584
DNA (849bp) protein (283aa)
purA; adenylosuccinate synthase (EC:6.3.4.4) Tax=RBG_13_Bathyarchaeota_38_9_curated
adenylosuccinate synthase (EC:6.3.4.4)
Adenylosuccinate synthetase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ATU0_9ARCH
13_1_20cm_2_scaffold_1879_19
Candidatus Korarchaeum cryptofilum, Candidatus Korarchaeum, Korarchaeota, Archaea

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comp(14636..15190)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L6F5_KORCO
Uncharacterized protein {ECO:0000313|EMBL:ACB08034.1}; TaxID=374847 species="Archaea; Korarchaeota; Candidatus Korarchaeum.;" source="Korarchaeum cryptofilum (strain OPF8).;"
hypothetical protein
13_1_20cm_2_scaffold_1879_20
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(15301..15981)
DNA (681bp) protein (227aa)
2-phospho-L-lactate guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_02114}; Short=LP guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_02114};; EC=2.7.7.68 {ECO:0000256|HAMAP-Rule:MF_02114};; TaxID=112989
2-phospho-L-lactate guanylyltransferase n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EGC4_9CHLR
hypothetical protein
13_1_20cm_2_scaffold_1879_21
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(15978..16919)
DNA (942bp) protein (314aa)
LPPG:FO 2-phospho-L-lactate transferase {ECO:0000313|EMBL:ABQ89545.1}; EC=2.7.1.- {ECO:0000313|EMBL:ABQ89545.1};; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexin
LPPG:FO 2-phospho-L-lactate transferase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5USE2_ROSS1
LPPG:FO 2-phospho-L-lactate transferase
13_1_20cm_2_scaffold_1879_22
unknown

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comp(16970..17368)
DNA (399bp) protein (133aa)

This feature has no annotations

13_1_20cm_2_scaffold_1879_23
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(17379..19205)
DNA (1827bp) protein (609aa)
glucosamine--fructose-6-phosphate aminotransferase (isomerizing) (EC:2.6.1.16)
hypothetical protein n=1 Tax=Crenarchaeota archaeon SCGC AAA471-B05 RepID=UPI00036C48FC
glucosamine-fructose-6-phosphate aminotransferase Tax=RBG_16_Bathyarchaeota_48_13_curated
13_1_20cm_2_scaffold_1879_24
unknown

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comp(19275..19715)
DNA (441bp) protein (147aa)

This feature has no annotations

13_1_20cm_2_scaffold_1879_25
unknown

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comp(19835..20434)
DNA (600bp) protein (200aa)

This feature has no annotations

13_1_20cm_2_scaffold_1879_26
unknown

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comp(20554..20733)
DNA (180bp) protein (60aa)

This feature has no annotations

13_1_20cm_2_scaffold_1879_27
RBG_16_Archaea_50_20_curated, Archaea

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20909..21958
DNA (1050bp) protein (350aa)
Asd; aspartate-semialdehyde dehydrogenase (EC:1.2.1.11); K00133 aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] Tax=RBG_16_Archaea_50_20_curated
Asd; aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TVK0_METKA
13_1_20cm_2_scaffold_1879_28

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comp(21983..22468)
DNA (486bp) protein (162aa)
AsnC family transcriptional regulator n=1 Tax=Nitrosopumilus sp. SJ RepID=UPI00037E27C7
Marine sediment metagenome DNA, contig: S01H1_L05582 {ECO:0000313|EMBL:GAF82676.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
putative HTH-type transcriptional regulator
13_1_20cm_2_scaffold_1879_29
Pyrococcus abyssi, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(22465..22812)
DNA (348bp) protein (116aa)
Glutamyl-tRNA(Gln) amidotransferase subunit E {ECO:0000255|HAMAP-Rule:MF_00588}; Short=Glu-ADT subunit E {ECO:0000255|HAMAP-Rule:MF_00588};; EC=6.3.5.- {ECO:0000255|HAMAP-Rule:MF_00588};; TaxID=272844
Glutamyl-tRNA(Gln) amidotransferase subunit E n=1 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=GATE_PYRAB
glutamyl-tRNA(Gln) amidotransferase subunit E
Displaying 29 items

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