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13_1_20cm_2_scaffold_305

Search features with annotation key words

Displaying items 1-30 of 49 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_305_1
Methanosalsum zhilinae, Methanosalsum, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2..688
DNA (687bp) protein (229aa)
Threonine synthase {ECO:0000256|PIRNR:PIRNR038945}; EC=4.2.3.1 {ECO:0000256|PIRNR:PIRNR038945};; TaxID=679901 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; M
Threonine synthase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XL04_METZD
threonine synthase
13_1_20cm_2_scaffold_305_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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685..1701
DNA (1017bp) protein (339aa)
Homoserine dehydrogenase {ECO:0000313|EMBL:AFU58628.1}; EC=1.1.1.3 {ECO:0000313|EMBL:AFU58628.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeracea
hom; homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0II55_NITGG
13_1_20cm_2_scaffold_305_3
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

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1715..2785
DNA (1071bp) protein (357aa)
aspartate kinase; K00928 aspartate kinase [EC:2.7.2.4] Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
thrA; aspartokinase (EC:2.7.2.4)
Aspartokinase n=1 Tax=uncultured archaeon RepID=I3RKW3_9ARCH
13_1_20cm_2_scaffold_305_4
uncultured crenarchaeote, Crenarchaeota, Archaea

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2791..3039
DNA (249bp) protein (83aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=29281 species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote.;"
aspartate kinase (EC:2.7.2.4)
Aspartokinase n=2 Tax=Archaea RepID=E6N7I9_9ARCH
13_1_20cm_2_scaffold_305_5
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(3054..4073)
DNA (1020bp) protein (340aa)
Small GTP-binding protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIF3_NITGG
small GTP-binding protein Tax=RBG_13_Bathyarchaeota_38_9_curated
small GTP-binding protein
13_1_20cm_2_scaffold_305_6
unknown

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comp(4393..4635)
DNA (243bp) protein (81aa)

This feature has no annotations

13_1_20cm_2_scaffold_305_7
RBG_16_Archaea_50_20_curated, Archaea

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4648..5808
DNA (1161bp) protein (387aa)
Putative aminotransferase n=1 Tax=Vulcanisaeta moutnovskia (strain 768-28) RepID=F0QTR3_VULM7
aminotransferase Tax=RBG_16_Archaea_50_20_curated
aminotransferase
13_1_20cm_2_scaffold_305_8
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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5812..6405
DNA (594bp) protein (198aa)
GMP synthase subunit A; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] Tax=RBG_16_Thaumarchaeota_49_8_curated
Glutamine amidotransferase class-I n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S0B1_9FIRM
GMP synthase
13_1_20cm_2_scaffold_305_9

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comp(6424..7302)
DNA (879bp) protein (293aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:00
ctaB2; protoheme IX farnesyltransferase (EC:2.5.1.-)
Protoheme IX farnesyltransferase n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D4P5_9ARCH
13_1_20cm_2_scaffold_305_10
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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7461..8132
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Streptomyces sp. CNT372 RepID=UPI00035F19B0
putative integral membrane protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
13_1_20cm_2_scaffold_305_11

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comp(8106..8657)
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-A16 RepID=UPI0003655A1B
Marine sediment metagenome DNA, contig: S06H3_L07525 {ECO:0000313|EMBL:GAI13412.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
13_1_20cm_2_scaffold_305_12
Palaeococcus pacificus, Palaeococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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8757..9530
DNA (774bp) protein (258aa)
ABC transporter related n=1 Tax=Caldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320) RepID=B9MLR1_CALBD
ABC transporter {ECO:0000313|EMBL:AIF68441.1}; TaxID=1343739 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Palaeococcus.;" source="Palaeococcus pacificus DY20341.;"
ABC transporter
13_1_20cm_2_scaffold_305_13
GWB2_Chloroflexi_54_36_curated, Chloroflexi, Bacteria

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9552..12110
DNA (2559bp) protein (853aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI0003768A8C
ABC transporter permease; K02004 putative ABC transport system permease protein Tax=GWB2_Chloroflexi_54_36_curated
hypothetical protein
13_1_20cm_2_scaffold_305_14
unknown

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12533..12748
DNA (216bp) protein (72aa)

This feature has no annotations

13_1_20cm_2_scaffold_305_15
Candidatus Pelagibacter sp. HTCC7211, Candidatus Pelagibacter, Pelagibacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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12821..13417
DNA (597bp) protein (199aa)
purH; bifunctional purine biosynthesis protein (EC:2.1.2.3 3.5.4.10)
Bifunctional purine biosynthesis protein n=1 Tax=Candidatus Pelagibacter sp. HTCC7211 RepID=B6BRP8_9PROT
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=439493 species="Bacteria; Proteobacteria; Alphaproteobacteria; Pelagibacterales; P
13_1_20cm_2_scaffold_305_16
RBG_13_Spirochaetes_51_14_curated, Spirochaetes, Bacteria

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13414..14499
DNA (1086bp) protein (362aa)
purH; bifunctional purine biosynthesis protein PurH (EC:2.1.2.3 3.5.4.10)
hypothetical protein n=1 Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI000366C3E3
AICAR transformylase/IMP cyclohydrolase PurH Tax=RBG_13_Spirochaetes_51_14_curated
13_1_20cm_2_scaffold_305_17
unknown

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14670..14855
DNA (186bp) protein (62aa)

This feature has no annotations

13_1_20cm_2_scaffold_305_18
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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14984..15358
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJM8_NITGG
Uncharacterized protein {ECO:0000313|EMBL:AFU59413.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
hypothetical protein
13_1_20cm_2_scaffold_305_19
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

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15529..15837
DNA (309bp) protein (103aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
hypothetical protein alias=ACD18_C00005G00009,ACD18_3293.13731.21G0009,ACD18_3293.13731.21_9 id=12873 tax=ACD18 species= OD1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=OD1, not OD1-i organism_group=OD1, not OD1-i organism_desc= OD1
hypothetical protein
13_1_20cm_2_scaffold_305_20
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(16162..17211)
DNA (1050bp) protein (350aa)
purM; phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1) Tax=RBG_16_Thaumarchaeota_49_8_curated
purM; phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2EJ09_9ARCH
13_1_20cm_2_scaffold_305_21
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(17214..18080)
DNA (867bp) protein (289aa)
purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase (EC:6.3.2.6) Tax=RBG_16_Thaumarchaeota_49_8_curated
purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase (EC:6.3.2.6)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI0003826EBE
13_1_20cm_2_scaffold_305_22
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(18081..18515)
DNA (435bp) protein (145aa)
phosphoribosylaminoimidazole carboxylase catalytic subunit; K01588 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] Tax=RBG_16_Thaumarchaeota_49_8_curated
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=PURE_METJA
phosphoribosylaminoimidazole carboxylase catalytic subunit
13_1_20cm_2_scaffold_305_23
Acetohalobium arabaticum, Acetohalobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

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comp(18512..19108)
DNA (597bp) protein (199aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=574087 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halobactero
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QVK5_ACEAZ
5-formyltetrahydrofolate cyclo-ligase
13_1_20cm_2_scaffold_305_24
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19105..19965)
DNA (861bp) protein (287aa)
methylenetetrahydrofolate dehydrogenase (NADP(+)) (EC:1.5.1.5)
Bifunctional protein FolD n=2 Tax=Caldicellulosiruptor RepID=E4S528_CALKI
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] li
13_1_20cm_2_scaffold_305_25
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(19962..20585)
DNA (624bp) protein (208aa)
purN; phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Putative Formyl transferase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ATI1_9ARCH
Putative Formyl transferase {ECO:0000313|EMBL:CDI05889.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
13_1_20cm_2_scaffold_305_26

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comp(20590..22122)
DNA (1533bp) protein (511aa)
phosphoribosylamine/glycine ligase (EC:6.3.4.13)
Phosphoribosylamine/glycine ligase n=1 Tax=uncultured archaeon W5-61a RepID=H9BX98_9ARCH rbh
Phosphoribosylamine/glycine ligase {ECO:0000313|EMBL:AFD03420.1}; TaxID=1131008 species="Archaea; environmental samples.;" source="uncultured archaeon W5-61a.;"
13_1_20cm_2_scaffold_305_27

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comp(22119..22628)
DNA (510bp) protein (170aa)
Amidophosphoribosyltransferase (EC:2.4.2.14)
Glutamine phosphoribosylpyrophosphate amidotransferase n=1 Tax=uncultured archaeon W5-61a RepID=H9BX97_9ARCH
Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000313|EMBL:AFD03419.1}; TaxID=1131008 species="Archaea; environmental samples.;" source="uncultured archaeon W5-61a.;"
13_1_20cm_2_scaffold_305_28
unknown

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22985..23098
DNA (114bp) protein (38aa)

This feature has no annotations

13_1_20cm_2_scaffold_305_29
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(23353..24783)
DNA (1431bp) protein (477aa)
purF; amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHU9_NITGG
class II glutamine amidotransferase Tax=RBG_16_Thaumarchaeota_49_8_curated
13_1_20cm_2_scaffold_305_30
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(24780..26996)
DNA (2217bp) protein (739aa)
phosphoribosylformylglycinamidine synthase 2 (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] Tax=RBG_16_Bathyarchaeota_48_13_curated
purL; phosphoribosylformylglycinamidine synthase II (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase 2 n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJS1_NITGG
Displaying items 1-30 of 49 in total

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