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13_1_20cm_2_scaffold_440

Search features with annotation key words

Displaying items 1-30 of 39 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_440_1
Thermococcus paralvinellae, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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3..620
DNA (618bp) protein (206aa)
Regulatory protein n=1 Tax=Thermococcus onnurineus (strain NA1) RepID=B6YVX6_THEON
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:AHF80125.1}; TaxID=582419 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus p
Transcriptional regulator, ArsR family
13_1_20cm_2_scaffold_440_2
unknown

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678..995
DNA (318bp) protein (106aa)

This feature has no annotations

13_1_20cm_2_scaffold_440_3
unknown

Not on your lists

1127..1330
DNA (204bp) protein (68aa)

This feature has no annotations

13_1_20cm_2_scaffold_440_4
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(1437..2297)
DNA (861bp) protein (287aa)
sdr-2; glucose/ribitol dehydrogenase family protein (EC:1.1.1.-)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IGB7_9CHLR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EFO79770.1}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;
13_1_20cm_2_scaffold_440_5
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

comp(2397..3545)
DNA (1149bp) protein (383aa)
hypothetical protein n=1 Tax=Fischerella muscicola RepID=UPI0002F4A7FA
AraC family transcriptional regulator {ECO:0000313|EMBL:KIY09337.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
araC; transcriptional regulator, AraC family
13_1_20cm_2_scaffold_440_6
RBG_16_Archaea_50_20_curated, Archaea

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comp(3805..5463)
DNA (1659bp) protein (553aa)
Thermosome alpha subunit (Thermosome subunit 1) (Chaperonin alpha subunit) (ThsA) n=1 Tax=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) RepID=C5A5K2_THEGJ
thsA-2; Thermosome alpha subunit (Thermosome subunit 1) (Chaperonin alpha subunit) (thsA) Tax=RBG_16_Archaea_50_20_curated
Chaperonin GroEL (HSP60 family)
13_1_20cm_2_scaffold_440_7
unknown

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5767..6489
DNA (723bp) protein (241aa)

This feature has no annotations

13_1_20cm_2_scaffold_440_8
Meiothermus ruber, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

6477..7265
DNA (789bp) protein (263aa)
Aminoglycoside nucleotidyltransferase n=2 Tax=Meiothermus RepID=D3PND8_MEIRD
Aminoglycoside nucleotidyltransferase {ECO:0000313|EMBL:AGK03783.1}; TaxID=504728 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus ruber (s
aminoglycoside nucleotidyltransferase
13_1_20cm_2_scaffold_440_9
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

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8090..8539
DNA (450bp) protein (150aa)
aldo/keto reductase n=1 Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B60D93
aldo/keto reductase Tax=RBG_13_Chloroflexi_56_8b_curated
oxidoreductase
13_1_20cm_2_scaffold_440_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8873..9415)
DNA (543bp) protein (181aa)
Transcriptional regulator, MarR family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIJ9_KORVE
MarR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
MarR family transcriptional regulator
13_1_20cm_2_scaffold_440_11
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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9634..10065
DNA (432bp) protein (144aa)
Ankyrin repeat-containing protein n=1 Tax=Bacillus cereus VD142 RepID=J7WFE1_BACCE
ankyrin Tax=RBG_16_Euryarchaeota_68_12_curated
ankyrin
13_1_20cm_2_scaffold_440_12
Thermoplasmatales archaeon I-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

10696..11976
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon I-plasma RepID=T0LBS2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB65272.1}; TaxID=667138 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon I-pl
hypothetical protein
13_1_20cm_2_scaffold_440_13
uncultured crenarchaeote 29d5, Crenarchaeota, Archaea

Not on your lists

comp(12210..12878)
DNA (669bp) protein (223aa)
Ubiquinone/menaquinone biosynthesis methyltransferase n=1 Tax=uncultured crenarchaeote 29d5 RepID=D4N6X4_9CREN
Ubiquinone/menaquinone biosynthesis methyltransferase {ECO:0000313|EMBL:ACY24460.1}; TaxID=684057 species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 29d5.;"
type 11 methyltransferase
13_1_20cm_2_scaffold_440_14
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

13039..13557
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-G05 RepID=UPI000375656E
hypothetical protein Tax=CG_Aenigma_01
hypothetical protein
13_1_20cm_2_scaffold_440_15
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(13554..13850)
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-G05 RepID=UPI000379F8D6
Putative uncharacterized protein Tax=RBG_16_Archaea_50_20_curated
transcriptional regulator
13_1_20cm_2_scaffold_440_16
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(13862..15091)
DNA (1230bp) protein (410aa)
Seroreactive antigen BMN1-5 (Fragment) n=1 Tax=mine drainage metagenome RepID=T1CUM5_9ZZZZ
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_20cm_2_scaffold_440_17
unknown

Not on your lists

15395..15700
DNA (306bp) protein (102aa)

This feature has no annotations

13_1_20cm_2_scaffold_440_18
R_OD1_Uhrbacteria_57_19, Uhrbacteria, Parcubacteria, Bacteria

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comp(15709..18468)
DNA (2760bp) protein (920aa)
vitamin B12-dependent ribonucleotide reductase (EC:1.17.4.1); K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] Tax=RIFCSPHIGHO2_02_FULL_OD1_Uhrbacteria_57_19_curated
vitamin B12-dependent ribonucleotide reductase (EC:1.17.4.1)
Ribonucleotide reductase of class II (Coenzyme B12-dependent) n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QG73_9DELT
13_1_20cm_2_scaffold_440_19
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

Not on your lists

comp(18652..19281)
DNA (630bp) protein (210aa)
O-methyltransferase family protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SRI1_9BACT
O-methyltransferase family protein {ECO:0000313|EMBL:BAL58698.1}; TaxID=1446466 species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;"
O-methyltransferase family protein
13_1_20cm_2_scaffold_440_20
unknown

Not on your lists

comp(19347..19883)
DNA (537bp) protein (179aa)

This feature has no annotations

13_1_20cm_2_scaffold_440_21
unknown

Not on your lists

20028..20300
DNA (273bp) protein (91aa)

This feature has no annotations

13_1_20cm_2_scaffold_440_22
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

20638..21369
DNA (732bp) protein (244aa)
Probable porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:00
hemC; porphobilinogen deaminase (EC:2.5.1.61)
Probable porphobilinogen deaminase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INK5_NITGG
13_1_20cm_2_scaffold_440_23
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

21870..23117
DNA (1248bp) protein (416aa)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|Rule
glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase n=2 Tax=Candidatus Nitrosoarchaeum limnia RepID=F3KHW9_9ARCH
13_1_20cm_2_scaffold_440_24
archaeon Loki, Lokiarchaeota, Archaea

Not on your lists

23114..24097
DNA (984bp) protein (328aa)
porphobilinogen synthase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KQ97_ARCVS
Delta-aminolevulinic acid dehydratase {ECO:0000313|EMBL:KKK43011.1}; TaxID=1538547 species="Archaea; Lokiarchaeota; 'Lokiarchaeum'.;" source="archaeon Loki.;"
13_1_20cm_2_scaffold_440_25

Not on your lists

24085..25377
DNA (1293bp) protein (431aa)
glutamate-1-semialdehyde aminotransferase (EC:5.4.3.8)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000367E42D rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN41525.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_20cm_2_scaffold_440_26
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

25490..26314
DNA (825bp) protein (275aa)
Probable porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:00
hemC; porphobilinogen deaminase (EC:2.5.1.61)
Probable porphobilinogen deaminase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INK5_NITGG
13_1_20cm_2_scaffold_440_27
Methanothermobacter sp. CaT2, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

26382..27146
DNA (765bp) protein (255aa)
uroporphyrinogen-III synthase (EC:4.2.1.75)
Uroporphyrinogen-III synthase n=1 Tax=Methanothermobacter thermautotrophicus CaT2 RepID=T2GGP1_METTF
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:BAM69381.1}; TaxID=866790 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanothermobacter.;" source="Meth
13_1_20cm_2_scaffold_440_28
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

27225..28058
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Crenarchaeota archaeon SCGC AAA471-B05 RepID=UPI00038021BF
aldo/keto reductase Tax=RBG_16_Archaea_50_20_curated
oxidoreductase
13_1_20cm_2_scaffold_440_29
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(28031..29008)
DNA (978bp) protein (326aa)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607};; Heme synthase {ECO:0000256|HAMAP-Rule:MF
ferrochelatase (EC:4.99.1.1)
Ferrochelatase n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EFF6_9CHLR
13_1_20cm_2_scaffold_440_30
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(29026..30069)
DNA (1044bp) protein (348aa)
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37); K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCL2_9BACT
Displaying items 1-30 of 39 in total

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