ggKbase home page

13_1_20cm_2_scaffold_1398

Search features with annotation key words

Displaying 20 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_1398_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1..825)
DNA (825bp) protein (275aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_20cm_2_scaffold_1398_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(812..1501)
DNA (690bp) protein (230aa)
Hypothetical membrane associated protein n=1 Tax=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) RepID=Q745Y8_THET2
PAS/PAC sensor-containing diguanylate cyclase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_20cm_2_scaffold_1398_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1486..1872)
DNA (387bp) protein (129aa)
Response regulator receiver protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LLJ9_9BURK
Transcriptional regulatory protein yycF Tax=GWA2_Rokubacteria_73_35_curated
OmpR; response regulator
13_1_20cm_2_scaffold_1398_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2002..2412)
DNA (411bp) protein (137aa)
atpC; ATP synthase subunit epsilon, membrane-bound, F1 sector (EC:3.6.3.14) Tax=GWA2_Rokubacteria_73_35_curated
atpC; ATP synthase subunit epsilon, membrane-bound, F1 sector (EC:3.6.3.14)
ATP synthase epsilon chain n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLY1_9BACT
13_1_20cm_2_scaffold_1398_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2413..3834)
DNA (1422bp) protein (474aa)
atpD; ATP synthase subunit beta, membrane-bound, F1 sector (EC:3.6.3.14) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
atpD; ATP synthase subunit beta, membrane-bound, F1 sector (EC:3.6.3.14)
ATP synthase subunit beta n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLY0_9BACT
13_1_20cm_2_scaffold_1398_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3831..4709)
DNA (879bp) protein (293aa)
atpG; ATP synthase subunit gamma, membrane-bound, F1 sector (EC:3.6.3.14) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
atpG; ATP synthase subunit gamma, membrane-bound, F1 sector (EC:3.6.3.14)
ATP synthase gamma chain n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLX9_9BACT
13_1_20cm_2_scaffold_1398_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(4710..6164)
DNA (1455bp) protein (485aa)
atpA; ATP synthase subunit alpha, membrane-bound, F1 sector (EC:3.6.3.14) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
atpA; ATP synthase subunit alpha, membrane-bound, F1 sector (EC:3.6.3.14)
ATP synthase subunit alpha n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLX8_9BACT
13_1_20cm_2_scaffold_1398_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6193..6741)
DNA (549bp) protein (183aa)
F0F1 ATP synthase subunit delta (EC:3.6.3.14); K02113 F-type H+-transporting ATPase subunit delta [EC:3.6.3.14] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ATP synthase delta chain (EC:3.6.3.14)
ATP synthase subunit delta n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLX7_9BACT
13_1_20cm_2_scaffold_1398_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6738..7322)
DNA (585bp) protein (195aa)
Sodium-transporting two-sector ATPase (EC:3.6.3.15) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Sodium-transporting two-sector ATPase (EC:3.6.3.15)
ATP synthase subunit b n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLX6_9BACT
13_1_20cm_2_scaffold_1398_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7427..8509)
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Desulfurispora thermophila RepID=UPI00036395B8
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
trmU; tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase
13_1_20cm_2_scaffold_1398_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(8514..9350)
DNA (837bp) protein (279aa)
ParBc, ParB-like nuclease domain n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67J37_SYMTH
ParB-like nuclease domain-containing protein; K03497 chromosome partitioning protein, ParB family Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ParB-like nuclease domain-containing protein
13_1_20cm_2_scaffold_1398_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(9343..10065)
DNA (723bp) protein (241aa)
Sporulation initiation inhibitor protein Soj n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LC45_THEPS
chromosome partitioning ATPase Soj; K03496 chromosome partitioning protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_20cm_2_scaffold_1398_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(10368..10898)
DNA (531bp) protein (177aa)
glucose inhibited division protein; K03501 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] Tax=GWA2_Rokubacteria_73_35_curated
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Desulfovibrio aespoeensis (strain ATCC 700646 / DSM 10631 / Aspo-2) RepID=E6VVU4_DESAO
glucose inhibited division protein
13_1_20cm_2_scaffold_1398_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(11050..12780)
DNA (1731bp) protein (577aa)
Membrane protein insertase YidC n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=YIDC_SYNAS
oxaA; inner membrane protein OxaA; K03217 preprotein translocase subunit YidC Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_20cm_2_scaffold_1398_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(13019..13342)
DNA (324bp) protein (108aa)
ribonuclease P protein component; K03536 ribonuclease P protein component [EC:3.1.26.5] Tax=GWA2_Rokubacteria_73_35_curated
ribonuclease P; K03536 ribonuclease P protein component [EC:3.1.26.5]
Ribonuclease P protein component n=1 Tax=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) RepID=B8DP13_DESVM
13_1_20cm_2_scaffold_1398_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists


comp(13369..13503)
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGX3_CHLTF
50S ribosomal protein L34; K02914 large subunit ribosomal protein L34 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
50S ribosomal protein L34
13_1_20cm_2_scaffold_1398_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

13810..15075
DNA (1266bp) protein (422aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHJ6_9BACT
dnaA; chromosomal replication initiator protein dnaA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
dnaA; chromosomal replication initiator protein dnaA
13_1_20cm_2_scaffold_1398_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

15240..16367
DNA (1128bp) protein (376aa)
dnaN; DNA polymerase III subunit beta (EC:2.7.7.7) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
dnaN; DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLW3_9BACT
13_1_20cm_2_scaffold_1398_19
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

16538..17353
DNA (816bp) protein (272aa)
recombinase F n=1 Tax=Paenibacillus fonticola RepID=UPI000365D729
DNA replication and repair protein RecF; K03629 DNA replication and repair protein RecF Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
recF protein
13_1_20cm_2_scaffold_1398_20
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

17350..18414
DNA (1065bp) protein (355aa)
gyrB; DNA gyrase subunit B (EC:5.99.1.3) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLW2_9BACT
Displaying 20 items

View Taxonomy