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13_1_20cm_2_scaffold_18880

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_18880_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3..167)
DNA (165bp) protein (55aa)
aminotransferase (EC:2.6.1.-); K00839 aminotransferase [EC:2.6.1.-] Tax=GWA2_Rokubacteria_73_35_curated
13_1_20cm_2_scaffold_18880_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(225..509)
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI00035DC62E
lipid-A-disaccharide synthase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
lipid A biosynthesis domain-containing protein
13_1_20cm_2_scaffold_18880_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(547..903)
DNA (357bp) protein (119aa)
XRE family transcriptional regulator n=1 Tax=Brevibacillus agri BAB-2500 RepID=L5MNN4_9BACL
transcriptional regulator y4dJ Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
transcriptional regulator
13_1_20cm_2_scaffold_18880_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(939..1262)
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI00037DBFEE
anti-ECFsigma factor, ChrR Tax=GWA2_Rokubacteria_73_35_curated
anti-ECFsigma factor, ChrR
13_1_20cm_2_scaffold_18880_5
R_WOR_2_63_39, WOR-2, Bacteria

Not on your lists

comp(1259..1567)
DNA (309bp) protein (103aa)
Rieske (2Fe-2S) iron-sulfur domain protein n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R3F2_ISOPI
Rieske (2Fe-2S) domain-containing protein
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_63_39_curated
13_1_20cm_2_scaffold_18880_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1578..1949)
DNA (372bp) protein (124aa)
DSBA oxidoreductase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MF76_9BACT
DSBA oxidoreductase Tax=GWA2_Rokubacteria_73_35_curated
DSBA oxidoreductase
13_1_20cm_2_scaffold_18880_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2010..2171)
DNA (162bp) protein (54aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_20cm_2_scaffold_18880_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

2241..2693
DNA (453bp) protein (151aa)
DoxX family protein n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E7W0_GEOLS
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
DoxX family protein
13_1_20cm_2_scaffold_18880_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2749..3420)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJQ6_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_20cm_2_scaffold_18880_10
R_NC10_66_22, NC10, Bacteria

Not on your lists

3568..4212
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI00037EC623
hypothetical protein; K07147 Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
hypothetical protein
13_1_20cm_2_scaffold_18880_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4380..5057
DNA (678bp) protein (226aa)
Heavy metal response regulator n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA26_9BACT
cztR; heavy metal response regulator; K07665 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
cztR; heavy metal response regulator
13_1_20cm_2_scaffold_18880_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5054..6457
DNA (1404bp) protein (468aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LJT7_SYNFM
integral membrane sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
integral membrane sensor signal transduction histidine kinase
13_1_20cm_2_scaffold_18880_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6528..6800
DNA (273bp) protein (91aa)
manganese and iron superoxide dismutase; K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Manganese and iron superoxide dismutase n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GDZ6_GEOUR
manganese and iron superoxide dismutase
13_1_20cm_2_scaffold_18880_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6829..7029
DNA (201bp) protein (67aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_20cm_2_scaffold_18880_15
Synechococcus sp. RS9916, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

7110..7796
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037F91EE
TPR repeat {ECO:0000313|EMBL:EAU72729.1}; TaxID=221359 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. RS9916.;"
hypothetical protein
13_1_20cm_2_scaffold_18880_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7793..9169
DNA (1377bp) protein (459aa)
Serine protease do-like (EC:3.4.21.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Serine protease do-like (EC:3.4.21.-)
Putative Serine protease do-like n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMR6_9BACT
13_1_20cm_2_scaffold_18880_17
unknown

Not on your lists

9181..9558
DNA (378bp) protein (126aa)

This feature has no annotations

13_1_20cm_2_scaffold_18880_18
unknown

Not on your lists

9564..9944
DNA (381bp) protein (127aa)

This feature has no annotations

13_1_20cm_2_scaffold_18880_19
unknown

Not on your lists

9941..10309
DNA (369bp) protein (123aa)

This feature has no annotations

13_1_20cm_2_scaffold_18880_20
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(10329..10580)
DNA (252bp) protein (84aa)
Arabinose efflux permease family protein n=1 Tax=Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4) RepID=I4D7B0_DESAJ
major facilitator superfamily protein Tax=CSP1_6_Rokubacteria
arabinose efflux permease family protein
13_1_20cm_2_scaffold_18880_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10928..11827
DNA (900bp) protein (300aa)
Zinc efflux system n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F3N1_9RHIZ
czcD; cation efflux system protein czcD; K03295 cation efflux system protein, CDF family Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
czcD; cation efflux system protein czcD
13_1_20cm_2_scaffold_18880_22
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

11845..12576
DNA (732bp) protein (244aa)
Altronate dehydratase (EC:4.2.1.7) Tax=GWA2_Rokubacteria_70_23_curated
galactarate dehydratase n=1 Tax=Zavarzinella formosa RepID=UPI000315820E
uxaA; altronate hydrolase
13_1_20cm_2_scaffold_18880_23
unknown

Not on your lists

comp(12465..13070)
DNA (606bp) protein (202aa)

This feature has no annotations

13_1_20cm_2_scaffold_18880_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(13210..13728)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAL6_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_20cm_2_scaffold_18880_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(13757..14044)
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI00037FB744
clpS; ATP-dependent Clp protease adaptor protein clpS Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
clpS; ATP-dependent Clp protease adaptor protein clpS
13_1_20cm_2_scaffold_18880_26
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(14145..14315)
DNA (171bp) protein (57aa)
hypothetical protein n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI00036B29D9
SMP-30/Gluconolaconase/LRE domain protein {ECO:0000313|EMBL:EEF57769.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphae
Displaying 26 items

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