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13_1_20cm_2_scaffold_3386

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_3386_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(1..999)
DNA (999bp) protein (333aa)
DNA mismatch repair protein MutS n=1 Tax=Myxococcus xanthus RepID=UPI0003083320
DNA mismatch repair protein MutS; K03555 DNA mismatch repair protein MutS Tax=GWA2_Rokubacteria_73_35_curated
mutS; DNA mismatch repair protein MutS
13_1_20cm_2_scaffold_3386_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(992..1447)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Thermococcus sp. CL1 RepID=I3ZRX7_9EURY alias=16ft_combo_ws3_scaffold_1154_38 id=5223396 tax=16ft_combo_ws3 species=Thermococcus sp. CL1 genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota
histidine triad (HIT) protein Tax=GWA2_Rokubacteria_73_35_curated
histidine triad (HIT) protein
13_1_20cm_2_scaffold_3386_3
unknown

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1671..1826
DNA (156bp) protein (52aa)

This feature has no annotations

13_1_20cm_2_scaffold_3386_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1972..2856)
DNA (885bp) protein (295aa)
Signal peptide peptidase SppA, 36K type (EC:3.1.3.26) Tax=GWA2_Rokubacteria_73_35_curated
peptidase S49, putative signal peptide peptidase SppA (EC:3.4.21.-)
Peptidase S49, putative signal peptide peptidase SppA n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAE5_9BACT
13_1_20cm_2_scaffold_3386_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(2865..4520)
DNA (1656bp) protein (552aa)
30S ribosomal protein S1 n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFA1_9BACT
rpsA; 30S ribosomal protein S1 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
rpsA; 30S ribosomal protein S1
13_1_20cm_2_scaffold_3386_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4537..5190)
DNA (654bp) protein (218aa)
cytidylate kinase; K00945 cytidylate kinase [EC:2.7.4.14] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U724_OCEP5
1-acyl-sn-glycerol-3-phosphate acyltransferase
13_1_20cm_2_scaffold_3386_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(5172..5831)
DNA (660bp) protein (220aa)
cytidylate kinase; K00945 cytidylate kinase [EC:2.7.4.14] Tax=GWA2_Rokubacteria_70_23_curated
cytidylate kinase n=1 Tax=Salisaeta longa RepID=UPI0003B46192
cytidylate kinase
13_1_20cm_2_scaffold_3386_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5968..7281)
DNA (1314bp) protein (438aa)
3-phosphoshikimate 1-carboxyvinyltransferase; K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
aroA; 3-phosphoshikimate 1-carboxyvinyltransferase AroA (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LIC3_THEPS rbh
13_1_20cm_2_scaffold_3386_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7278..8129)
DNA (852bp) protein (284aa)
prephenate dehydrogenase (EC:1.3.1.12); K04517 prephenate dehydrogenase [EC:1.3.1.12] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
cyclohexadienyl dehydrogenase n=1 Tax=Pseudomonas thermotolerans RepID=UPI000372F694
aroA; bifunctional cyclohexadienyl dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase
13_1_20cm_2_scaffold_3386_10
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(8131..9237)
DNA (1107bp) protein (369aa)
hisC; histidinol-phosphate aminotransferase (EC:2.6.1.9) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hisC; histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NGL4_DESAR rbh
13_1_20cm_2_scaffold_3386_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9247..10308)
DNA (1062bp) protein (354aa)
pheA; p-protein, bifunctional chorismate mutase/prephenate dehydratase (EC:4.2.1.51 5.4.99.5)
P-protein, bifunctional chorismate mutase/prephenate dehydratase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAD7_9BACT
pheA; chorismate mutase/prephenate dehydratase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_20cm_2_scaffold_3386_12
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(10607..11377)
DNA (771bp) protein (257aa)
pseudouridine synthase; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Pseudouridine synthase n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LG30_SYNFM
pseudouridine synthase
Displaying 12 items

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