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13_1_20cm_2_scaffold_3989

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_3989_1
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(2..277)
DNA (276bp) protein (92aa)
ISSpo2, transposase n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LW54_RUEPO
IS1380-family transposase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
ISSpo2, transposase
13_1_20cm_2_scaffold_3989_2
unknown

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345..458
DNA (114bp) protein (38aa)

This feature has no annotations

13_1_20cm_2_scaffold_3989_3
unknown

Not on your lists

comp(497..850)
DNA (354bp) protein (118aa)

This feature has no annotations

13_1_20cm_2_scaffold_3989_4
unknown

Not on your lists

comp(1174..1278)
DNA (105bp) protein (35aa)

This feature has no annotations

13_1_20cm_2_scaffold_3989_5
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

1455..2132
DNA (678bp) protein (226aa)
2,3-dihydroxybenzoate-amp ligase (EC:2.7.7.58); K02363 2,3-dihydroxybenzoate-AMP ligase [EC:2.7.7.58] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
2,3-dihydroxybenzoate-AMP ligase n=2 Tax=Thermobifida fusca RepID=Q47NR5_THEFY
2,3-dihydroxybenzoate-AMP ligase
13_1_20cm_2_scaffold_3989_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

2185..2358
DNA (174bp) protein (58aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI000377AF8F
sulfur carrier protein ThiS Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
13_1_20cm_2_scaffold_3989_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

2370..2681
DNA (312bp) protein (104aa)
phenylacetic acid degradation protein paaA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
13_1_20cm_2_scaffold_3989_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

2678..3508
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Frankia sp. QA3 RepID=I9KC38_9ACTO
phenylacetic acid degradation protein paaA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
phenylacetic acid degradation protein paaA
13_1_20cm_2_scaffold_3989_9
unknown

Not on your lists

3620..3835
DNA (216bp) protein (72aa)

This feature has no annotations

13_1_20cm_2_scaffold_3989_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3949..4458)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z380_9ACTN
putative sensor histidine kinase Tax=GWA2_Rokubacteria_70_23_curated
Crp/Fnr family transcriptional regulator
13_1_20cm_2_scaffold_3989_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4458..5468)
DNA (1011bp) protein (337aa)
Amidohydrolase n=1 Tax=Mycobacterium marinum (strain ATCC BAA-535 / M) RepID=B2HDA3_MYCMM
putative TIM-barrel fold metal-dependent hydrolase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
amidohydrolase
13_1_20cm_2_scaffold_3989_12
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(5483..7195)
DNA (1713bp) protein (571aa)
hypothetical protein; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=CSP1_6_Rokubacteria
acetolactate synthase catalytic subunit (EC:2.2.1.6)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI000378A836 rbh
13_1_20cm_2_scaffold_3989_13
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

7225..8178
DNA (954bp) protein (318aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C510_SPHTD
binding-protein-dependent transport system inner membrane protein; K15581 oligopeptide transport system permease protein Tax=GWC2_Rokubacteria_70_16_curated
binding-protein-dependent transport system inner membrane protein
13_1_20cm_2_scaffold_3989_14
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

8184..8375
DNA (192bp) protein (64aa)
Oligopeptide ABC transporter, permease protein n=2 Tax=Ketogulonicigenium vulgare RepID=E3EY05_KETVY
binding-protein-dependent transport system inner membrane protein; K02034 peptide/nickel transport system permease protein Tax=GWC2_Rokubacteria_70_16_curated
Oligopeptide ABC transporter, permease protein; K15582 oligopeptide transport system permease protein
13_1_20cm_2_scaffold_3989_15
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

8372..8992
DNA (621bp) protein (207aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C511_SPHTD
binding-protein-dependent transport system inner membrane protein; K02034 peptide/nickel transport system permease protein Tax=GWC2_Rokubacteria_70_16_curated
binding-protein-dependent transport system inner membrane protein
13_1_20cm_2_scaffold_3989_16
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

9013..10749
DNA (1737bp) protein (579aa)
Extracellular solute-binding protein family 5 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C512_SPHTD rbh
oligopeptide ABC transporter periplasmic oligopeptide-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
family 5 extracellular solute-binding protein
13_1_20cm_2_scaffold_3989_17
unknown

Not on your lists

10954..11118
DNA (165bp) protein (55aa)

This feature has no annotations

Displaying 17 items

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