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13_1_20cm_2_scaffold_6784

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_6784_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1..96
DNA (96bp) protein (32aa)
transcription termination factor Rho; K03628 transcription termination factor Rho Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_20cm_2_scaffold_6784_2
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists


316..531
DNA (216bp) protein (72aa)
50S ribosomal protein L31 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PL98_9FIRM
LSU ribosomal protein L31P Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
LSU ribosomal protein L31P
13_1_20cm_2_scaffold_6784_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

664..1521
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI00036656D5
prfA; peptide chain release factor 1 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
peptide chain release factor 1
13_1_20cm_2_scaffold_6784_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

1521..2420
DNA (900bp) protein (300aa)
protein-(glutamine-N5) methyltransferase; K02493 release factor glutamine methyltransferase [EC:2.1.1.-] Tax=GWA2_Rokubacteria_73_35_curated
Release factor glutamine methyltransferase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SGI2_RHOMR
protein-(glutamine-N5) methyltransferase
13_1_20cm_2_scaffold_6784_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2420..4261
DNA (1842bp) protein (614aa)
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Burkholderia oklahomensis RepID=UPI00016A40F3
UDP-N-acetylglucosamine 1-carboxyvinyltransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_20cm_2_scaffold_6784_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4258..5565
DNA (1308bp) protein (436aa)
hisD; histidinol dehydrogenase (EC:1.1.1.23) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hisD; histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase n=1 Tax=Laribacter hongkongensis (strain HLHK9) RepID=C1DAJ9_LARHH
13_1_20cm_2_scaffold_6784_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

5562..6167
DNA (606bp) protein (202aa)
hisB; imidazoleglycerol-phosphate dehydratase; K01693 imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase n=1 Tax=Acetonema longum DSM 6540 RepID=F7NEP0_9FIRM
13_1_20cm_2_scaffold_6784_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6208..6828
DNA (621bp) protein (207aa)
imidazole glycerol phosphate synthase subunit hisH; K02501 glutamine amidotransferase [EC:2.4.2.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8E0S8_9FIRM
imidazole glycerol phosphate synthase subunit hisH
13_1_20cm_2_scaffold_6784_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

6825..7619
DNA (795bp) protein (265aa)
hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16); K01814 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Thiorhodospira sibirica ATCC 700588 RepID=G4E8J1_9GAMM
13_1_20cm_2_scaffold_6784_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

7619..8392
DNA (774bp) protein (258aa)
imidazole glycerol phosphate synthase subunit HisF; K02500 cyclase [EC:4.1.3.-] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
HisF-LUCA n=1 Tax=synthetic construct RepID=UPI0003C0DDA4
imidazole glycerol phosphate synthase
13_1_20cm_2_scaffold_6784_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8389..9021
DNA (633bp) protein (211aa)
phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase; K11755 phosphoribosyl-ATP pyrophosphohydrolase / phosphoribosyl-AMP cyclohydrolase [EC:3.6.1.31 3.5.4.19] Tax=RIFCSPLOWO2_02_FULL_
hisI; histidine biosynthesis bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase (EC:3.5.4.19 3.6.1.31)
Histidine biosynthesis bifunctional protein HisIE n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHZ5_9BACT
13_1_20cm_2_scaffold_6784_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9103..9483
DNA (381bp) protein (127aa)
Putative uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_20cm_2_scaffold_6784_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

9488..10249
DNA (762bp) protein (254aa)
Toluene transporter subunit: membrane component of ABC superfamily n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK80_9BACT
yrbE; toluene ABC transporter subunit membrane protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
yrbE; toluene ABC transporter subunit membrane protein
13_1_20cm_2_scaffold_6784_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10256..10999
DNA (744bp) protein (248aa)
ABC transport system ATP-binding protein n=1 Tax=uncultured planctomycete RepID=H5SCD9_9BACT
ABC transporter ATPase; K02065 putative ABC transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC transporter ATPase
13_1_20cm_2_scaffold_6784_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11004..12212
DNA (1209bp) protein (403aa)
Mce family protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CCP6_MYXFH
ABC transporter substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Mce family protein
13_1_20cm_2_scaffold_6784_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

12209..13504
DNA (1296bp) protein (432aa)
DNA repair protein RadA (EC:2.1.1.63)
DNA repair protein radA n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E1N6_GEOLS
radA; DNA repair protein RadA; K04485 DNA repair protein RadA/Sms Tax=GWA2_Rokubacteria_73_35_curated
13_1_20cm_2_scaffold_6784_17
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

13509..13949
DNA (441bp) protein (147aa)
hypothetical protein Tax=CSP1_6_Rokubacteria
Displaying 17 items

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