ggKbase home page

13_1_20cm_2_scaffold_6803

Search features with annotation key words

Displaying 16 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_6803_1
Desulfovibrio alaskensis, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(125..769)
DNA (645bp) protein (215aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=207559 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibriona
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Desulfovibrio desulfuricans (strain G20) RepID=Q30VA5_DESDG
integral membrane sensor signal transduction histidine kinase
13_1_20cm_2_scaffold_6803_2
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(769..2169)
DNA (1401bp) protein (467aa)
acetoacetate metabolism regulatory protein AtoC n=1 Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI00036C7B55
Putative response regulator in two-component regulatory system, sigma 54-dependent {ECO:0000313|EMBL:CBE68926.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;
response regulator in two-component regulatory system, sigma 54-dependent
13_1_20cm_2_scaffold_6803_3
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2283..2600)
DNA (318bp) protein (106aa)
Transport-associated n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZMA1_OPITP
transport-associated protein; K04065 hyperosmotically inducible periplasmic protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
transport-associated
13_1_20cm_2_scaffold_6803_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2820..3224)
DNA (405bp) protein (135aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_20cm_2_scaffold_6803_5
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(3263..5137)
DNA (1875bp) protein (625aa)
dnaE2; DNA polymerase III, alpha subunit (EC:2.7.7.7); K14162 error-prone DNA polymerase [EC:2.7.7.7] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
dnaE2; DNA polymerase (EC:2.7.7.7)
DNA polymerase III, alpha subunit subfamily, putative n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JLP8_9BACT
13_1_20cm_2_scaffold_6803_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(5188..6498)
DNA (1311bp) protein (437aa)
DNA polymerase III subunit alpha (EC:2.7.7.7); K14162 error-prone DNA polymerase [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
DNA polymerase III subunit alpha n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B5F369
DNA polymerase III subunit alpha
13_1_20cm_2_scaffold_6803_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(6755..8329)
DNA (1575bp) protein (525aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B2F72E
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_20cm_2_scaffold_6803_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8311..8865)
DNA (555bp) protein (185aa)
RecA domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QX0_SOLUE
recombinase A Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
recombinase A
13_1_20cm_2_scaffold_6803_9
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9238..10512
DNA (1275bp) protein (425aa)
Cardiolipin synthetase {ECO:0000313|EMBL:CDS54800.1}; EC=2.7.8.- {ECO:0000313|EMBL:CDS54800.1};; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; P
Phospholipase D/Transphosphatidylase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJZ2_THIDA
phospholipase D/transphosphatidylase
13_1_20cm_2_scaffold_6803_10
unknown

Not on your lists

comp(10915..11115)
DNA (201bp) protein (67aa)

This feature has no annotations

13_1_20cm_2_scaffold_6803_11
unknown

Not on your lists

11235..11435
DNA (201bp) protein (67aa)

This feature has no annotations

13_1_20cm_2_scaffold_6803_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(11449..12102)
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI000349B2FA
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
radical SAM protein
13_1_20cm_2_scaffold_6803_13
unknown

Not on your lists

12125..12988
DNA (864bp) protein (288aa)

This feature has no annotations

13_1_20cm_2_scaffold_6803_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

13111..13785
DNA (675bp) protein (225aa)
3-hydroxyacyl-CoA dehydrogenase type II (EC:1.1.1.35)
3-hydroxyacyl-CoA dehydrogenase type II n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08PN9_STIAD
hsd17b10, abad, camr, erab, hadh2, hcd2, hsd10, mhbd, mrpp2, mrx17, mrx31, mrxs10, schad, sdr5c1; hydroxysteroid (17-beta) dehydrogenase 10; K08683 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxy-2-methyl
13_1_20cm_2_scaffold_6803_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

13991..14695
DNA (705bp) protein (235aa)
Spermidine synthase n=1 Tax=Gallaecimonas xiamenensis 3-C-1 RepID=K2J4A6_9GAMM
spermidine synthase-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_20cm_2_scaffold_6803_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(14671..16350)
DNA (1680bp) protein (560aa)
ABC transporter related protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LXN9_HALO1 alias=16ft_combo_ws3_scaffold_10754_31 id=5223300 tax=16ft_combo_ws3 species=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria
ABC transporter Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC transporter
Displaying 16 items

View Taxonomy