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13_1_20cm_2_scaffold_7280

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_7280_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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3..167
DNA (165bp) protein (55aa)
haloacid dehalogenase (EC:3.8.1.2); K01560 2-haloacid dehalogenase [EC:3.8.1.2] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Haloacid dehalogenase, type II n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J8J2_ANAD2
haloacid dehalogenase
13_1_20cm_2_scaffold_7280_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(303..461)
DNA (159bp) protein (53aa)
hypothetical protein n=1 Tax=Marine Group I thaumarchaeote SCGC AB-629-I23 RepID=UPI000360F8B2
fused DNA topoisomerase I/SWI domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
fused DNA topoisomerase I/SWI domain-containing protein
13_1_20cm_2_scaffold_7280_3
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(615..1754)
DNA (1140bp) protein (380aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003750DFF rbh
Uncharacterized protein {ECO:0000313|EMBL:ETW98117.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
13_1_20cm_2_scaffold_7280_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(1751..2545)
DNA (795bp) protein (265aa)
fabG3; 3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100) Tax=GWC2_Rokubacteria_70_16_curated
Short-chain dehydrogenase/reductase SDR n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZXB5_MAHA5
short-chain dehydrogenase/reductase SDR
13_1_20cm_2_scaffold_7280_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(2542..3327)
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003A94848
alpha/beta hydrolase fold protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
alpha/beta hydrolase fold protein
13_1_20cm_2_scaffold_7280_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(3324..4604)
DNA (1281bp) protein (427aa)
Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases n=1 Tax=uncultured actinobacterium HF0770_13M05 RepID=E7C747_9ACTN rbh
luciferase family protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
luciferase family protein
13_1_20cm_2_scaffold_7280_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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5452..6684
DNA (1233bp) protein (411aa)
Phosphomethylpyrimidine synthase n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JL85_9BACT
thiamine biosynthesis protein ThiC; K03147 thiamine biosynthesis protein ThiC Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
thiamine biosynthesis protein ThiC
13_1_20cm_2_scaffold_7280_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(6669..7109)
DNA (441bp) protein (147aa)
Acetoacetate metabolism regulatory protein atoC (Ornithine/arginine decarboxylase inhibitor) (Ornithine decarboxylase antizyme) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML70_9BACT
two component transcriptional regulator Tax=GWA2_Rokubacteria_73_35_curated
atoC; acetoacetate metabolism regulatory protein atoC (Ornithine/arginine decarboxylase inhibitor) (Ornithine decarboxylase antizyme)
13_1_20cm_2_scaffold_7280_9
unknown

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7159..7326
DNA (168bp) protein (56aa)

This feature has no annotations

13_1_20cm_2_scaffold_7280_10
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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comp(7399..8760)
DNA (1362bp) protein (454aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7UUV9_DESML
ntrC; nitrogen regulation protein NR(I); K07712 two-component system, NtrC family, nitrogen regulation response regulator GlnG Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
transcriptional regulator
13_1_20cm_2_scaffold_7280_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(8912..9985)
DNA (1074bp) protein (358aa)
signal transduction histidine kinase, nitrogen specific, NtrB (EC:2.7.13.3); K07708 two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] Tax=RIFCSPLOWO2_12
signal transduction histidine kinase, nitrogen specific, NtrB (EC:2.7.13.3)
Signal transduction histidine kinase, nitrogen specific, NtrB n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M6L7_GEODF
13_1_20cm_2_scaffold_7280_12
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists


comp(10170..11132)
DNA (963bp) protein (321aa)
O-sialoglycoprotein endopeptidase; K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJL9_9BACT
O-sialoglycoprotein endopeptidase, with actin-like ATPase domain (ygjD,gcp)
Displaying 12 items

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