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13_1_20cm_2_scaffold_766

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_766_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3..671)
DNA (669bp) protein (223aa)
Sec-independent protein translocase protein TatC n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MEI1_9BACT
Sec-independent protein translocase protein TatC Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Sec-independent protein translocase protein TatC
13_1_20cm_2_scaffold_766_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(678..1466)
DNA (789bp) protein (263aa)
phosphomethylpyrimidine kinase; K00941 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] Tax=GWA2_Rokubacteria_73_35_curated
Phosphomethylpyrimidine kinase n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G7J0_CHLAD rbh
phosphomethylpyrimidine kinase
13_1_20cm_2_scaffold_766_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(1557..2261)
DNA (705bp) protein (235aa)
uroporphyrin-III C/tetrapyrrole methyltransferase; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G7Y8_GEOUR
uroporphyrin-III C/tetrapyrrole methyltransferase
13_1_20cm_2_scaffold_766_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2401..3255)
DNA (855bp) protein (285aa)
clpX; ATP-dependent Clp protease ATP-binding subunit clpX (EC:3.4.21.92) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
clpX; ATP-dependent Clp protease ATP-binding subunit clpX (EC:3.4.21.92)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHU0_9BACT
13_1_20cm_2_scaffold_766_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3213..3584)
DNA (372bp) protein (124aa)
clpX; ATP-dependent Clp protease ATP-binding subunit clpX (EC:3.4.21.92) Tax=GWA2_Rokubacteria_73_35_curated
clpX; ATP-dependent Clp protease ATP-binding subunit clpX (EC:3.4.21.92)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHU0_9BACT
13_1_20cm_2_scaffold_766_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3610..4245)
DNA (636bp) protein (212aa)
ATP-dependent Clp protease, proteolytic subunit ClpP (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ATP-dependent Clp protease, proteolytic subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Desulfurispirillum indicum (strain ATCC BAA-1389 / S5) RepID=E6W0M5_DESIS
13_1_20cm_2_scaffold_766_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(4322..5590)
DNA (1269bp) protein (423aa)
Trigger factor n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GEZ3_9FIRM
trigger factor; K03545 trigger factor Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
trigger factor
13_1_20cm_2_scaffold_766_trna_4
unknown

Not on your lists

comp(5623..5707)
DNA (85bp)
transferRNA
13_1_20cm_2_scaffold_766_8
unknown

Not on your lists

comp(6465..6662)
DNA (198bp) protein (66aa)

This feature has no annotations

13_1_20cm_2_scaffold_766_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

7050..7346
DNA (297bp) protein (99aa)
Gas vesicle structural protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=GVPA_KORVE
gas vesicle protein GVPa Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Gas vesicle structural protein
13_1_20cm_2_scaffold_766_10
Leptospirillum ferrodiazotrophum, Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

7859..8170
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6I0X6_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:EES51495.1}; TaxID=412449 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum ferrodiazotrophum.;
13_1_20cm_2_scaffold_766_11
Leptospirillum sp. Group II '5-way CG', Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

8176..9207
DNA (1032bp) protein (344aa)
Putative uncharacterized protein n=1 Tax=Leptospirillum sp. Group II '5-way CG' RepID=B6APN6_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:EDZ39222.1}; TaxID=419541 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum sp. Group II '5-way
hypothetical protein
13_1_20cm_2_scaffold_766_12
Leptospirillum sp. Group II '5-way CG', Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

9197..10030
DNA (834bp) protein (278aa)
Putative uncharacterized protein n=1 Tax=Leptospirillum sp. Group II '5-way CG' RepID=B6APN5_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:EDZ39221.1}; TaxID=419541 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum sp. Group II '5-way
hypothetical protein
13_1_20cm_2_scaffold_766_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10120..11406)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PLZ9_9BRAD
major facilitator superfamily permease Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
major facilitator superfamily permease
13_1_20cm_2_scaffold_766_14
Methanosarcina sp. 2.H.T.1A.15, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11560..11748)
DNA (189bp) protein (63aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI0003819FC4
Uncharacterized protein {ECO:0000313|EMBL:KKG28803.1}; TaxID=1483596 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina s
L-sorbosone dehydrogenase
13_1_20cm_2_scaffold_766_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(11745..12722)
DNA (978bp) protein (326aa)
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WNG1_VEREI
D-isomer specific 2-hydroxyacid dehydrogenase Tax=GWA2_Rokubacteria_73_35_curated
D-isomer specific 2-hydroxyacid dehydrogenase
13_1_20cm_2_scaffold_766_16
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(12770..13765)
DNA (996bp) protein (332aa)
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95] Tax=GWC2_Rokubacteria_70_16_curated
D-isomer specific 2-hydroxyacid dehydrogenase (EC:1.1.1.95)
D-3-phosphoglycerate dehydrogenase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1ITV0_9BRAD
13_1_20cm_2_scaffold_766_17
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13991..14746
DNA (756bp) protein (252aa)
Putative transcriptional regulator n=1 Tax=Rhizobium sp. CF142 RepID=J1TDF3_9RHIZ
Putative transcriptional regulator {ECO:0000313|EMBL:EJJ29846.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizob
helix-turn-helix domain protein
13_1_20cm_2_scaffold_766_18
unknown

Not on your lists

comp(14812..15645)
DNA (834bp) protein (278aa)

This feature has no annotations

13_1_20cm_2_scaffold_766_trna_3
unknown

Not on your lists

comp(15847..15919)
DNA (73bp)
transferRNA
13_1_20cm_2_scaffold_766_trna_2
unknown

Not on your lists

comp(15934..16007)
DNA (74bp)
transferRNA
13_1_20cm_2_scaffold_766_trna_1
unknown

Not on your lists

comp(16026..16099)
DNA (74bp)
transferRNA
Displaying 22 items

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