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13_1_20cm_2_scaffold_855

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_855_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2..499
DNA (498bp) protein (166aa)
endonuclease III (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
nth; endonuclease III (EC:4.2.99.18)
Endonuclease III n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHG5_9BACT
13_1_20cm_2_scaffold_855_2
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists


626..1081
DNA (456bp) protein (152aa)
50S ribosomal protein L13 n=1 Tax=Bacillus cellulosilyticus (strain ATCC 21833 / DSM 2522 / FERM P-1141 / JCM 9156 / N-4) RepID=E6TTA6_BACCJ
50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
rplM; large subunit ribosomal protein L13
13_1_20cm_2_scaffold_855_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists


1081..1476
DNA (396bp) protein (132aa)
30S ribosomal protein S9 n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGN9_CHLTF
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
30S ribosomal protein S9
13_1_20cm_2_scaffold_855_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

1484..2545
DNA (1062bp) protein (354aa)
argC; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38); K00145 N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] Tax=GWA2_Rokubacteria_73_35_curated
argC; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Geobacter sp. (strain M21) RepID=ARGC_GEOSM
13_1_20cm_2_scaffold_855_5
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

2545..3801
DNA (1257bp) protein (419aa)
arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1); K00620 glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_cur
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D505_PELTS
ArgJ; N-acetylglutamate synthase
13_1_20cm_2_scaffold_855_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists


3952..4713
DNA (762bp) protein (254aa)
30S ribosomal protein S2 n=3 Tax=Alicyclobacillus acidocaldarius RepID=C8WWH4_ALIAD
30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
rpsB; 30S ribosomal protein S2
13_1_20cm_2_scaffold_855_7
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

4716..5459
DNA (744bp) protein (248aa)
Elongation factor Ts n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XXB6_9BACT
translation elongation factor Ts; K02357 elongation factor Ts Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
tsf; elongation factor Ts
13_1_20cm_2_scaffold_855_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

5428..6057
DNA (630bp) protein (210aa)
pyrH; uridylate kinase; K09903 uridylate kinase [EC:2.7.4.22] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Uridylate kinase n=1 Tax=Thermovibrio ammonificans (strain DSM 15698 / JCM 12110 / HB-1) RepID=E8T358_THEA1
uridylate kinase
13_1_20cm_2_scaffold_855_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6079..6633
DNA (555bp) protein (185aa)
Ribosome-recycling factor n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JXI1_DESFR
ribosome recycling factor; K02838 ribosome recycling factor Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
frr; ribosome recycling factor
13_1_20cm_2_scaffold_855_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6648..7430
DNA (783bp) protein (261aa)
uppS; UDP pyrophosphate synthetase (EC:2.5.1.31); K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
uppS; UDP pyrophosphate synthetase (EC:2.5.1.31)
UDP pyrophosphate synthase n=1 Tax=Brevibacillus brevis RepID=UPI00037B4C23
13_1_20cm_2_scaffold_855_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

7447..8277
DNA (831bp) protein (277aa)
cdsA; phosphatidate cytidylyltransferase; K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41] Tax=GWA2_Rokubacteria_73_35_curated
Phosphatidate cytidylyltransferase n=1 Tax=Thermincola potens (strain JR) RepID=D5XEZ9_THEPJ
phosphatidate cytidylyltransferase
13_1_20cm_2_scaffold_855_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

8274..9443
DNA (1170bp) protein (390aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267); K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIW9_CHLTF
13_1_20cm_2_scaffold_855_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9449..10813
DNA (1365bp) protein (455aa)
rseP; regulator of sigma E protease (EC:3.4.24.-); K11749 regulator of sigma E protease [EC:3.4.24.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
rseP; regulator of sigma E protease (EC:3.4.24.-)
Peptidase M50 n=1 Tax=Candidatus Nitrospira defluvii RepID=B3U4T9_9BACT
13_1_20cm_2_scaffold_855_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

10823..11923
DNA (1101bp) protein (367aa)
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJF6_9BACT
13_1_20cm_2_scaffold_855_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

11923..12255
DNA (333bp) protein (111aa)
Ferredoxin n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIE9_CHLTF
ferredoxin Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ferredoxin
13_1_20cm_2_scaffold_855_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

12260..12439
DNA (180bp) protein (60aa)
proS; prolyl-tRNA synthetase (ProRS) (EC:6.1.1.15) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
proS; prolyl-tRNA synthetase (ProRS) (EC:6.1.1.15)
Proline--tRNA ligase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJF7_9BACT
Displaying 16 items

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