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13_1_20cm_2_scaffold_1278

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Displaying 20 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_1278_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1..387)
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Marinobacterium rhizophilum RepID=UPI0003733298
Lytic transglycosylase, catalytic Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
lytic murein transglycosylase
13_1_20cm_2_scaffold_1278_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

558..2147
DNA (1590bp) protein (530aa)
DNA polymerase III, subunit gamma/tau Tax=GWA2_Rokubacteria_73_35_curated
13_1_20cm_2_scaffold_1278_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(2169..2573)
DNA (405bp) protein (135aa)
id=4885132 Tax=GWC2_Rokubacteria_70_16_curated
13_1_20cm_2_scaffold_1278_4
CG_Delta_02, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2815..3435)
DNA (621bp) protein (207aa)
ABC transporter ATP-binding protein n=1 Tax=Thermus islandicus RepID=UPI0003B5CCDA
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein Tax=CG_Delta_02
putative branched-chain amino acid ABC transporter ATP-binding protein
13_1_20cm_2_scaffold_1278_5
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

3682..4119
DNA (438bp) protein (146aa)
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
13_1_20cm_2_scaffold_1278_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(4277..5008)
DNA (732bp) protein (244aa)
Inner-membrane translocator n=1 Tax=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) RepID=A8F6A2_THELT
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
inner-membrane translocator
13_1_20cm_2_scaffold_1278_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(5251..6123)
DNA (873bp) protein (291aa)
Inner-membrane translocator n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C901_SPHTD
braD; branched chain amino acid ABC transporter; K01997 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
inner-membrane translocator
13_1_20cm_2_scaffold_1278_8
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(6133..7455)
DNA (1323bp) protein (441aa)
Receptor family ligand binding region family protein 19 n=1 Tax=Acetonema longum DSM 6540 RepID=F7NHT0_9FIRM
braC; Leu/Ile/Val-binding protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
braC; Leu/Ile/Val-binding protein
13_1_20cm_2_scaffold_1278_9
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7544..8698
DNA (1155bp) protein (385aa)
Alanine racemase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I7A2L3_MELRP rbh
Alanine racemase {ECO:0000313|EMBL:AKF03326.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus a
alanine racemase
13_1_20cm_2_scaffold_1278_10
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8735..9154)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CM06_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
hypothetical protein
13_1_20cm_2_scaffold_1278_11
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9151..9417)
DNA (267bp) protein (89aa)
Prevent-host-death family protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SCK2_GEOOG
id=3847105 Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
prevent-host-death family protein
13_1_20cm_2_scaffold_1278_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(9470..10291)
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00037DC701
sugar ABC transporter permease Tax=GWC2_Rokubacteria_70_16_curated
putative sugar ABC transporter, permease protein
13_1_20cm_2_scaffold_1278_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(10292..11185)
DNA (894bp) protein (298aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Paenibacillus lactis 154 RepID=G4H8H2_9BACL
binding-protein-dependent transport systems inner membrane component; K02025 multiple sugar transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
binding-protein-dependent transport systems inner membrane component
13_1_20cm_2_scaffold_1278_14
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(11208..12509)
DNA (1302bp) protein (434aa)
ABC transporter, solute-binding protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EL41_9FIRM
family 1 extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
13_1_20cm_2_scaffold_1278_15
RLO_PLX_64_10, Bacteria

Not on your lists

comp(12534..13427)
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI000378658A
phytanoyl-CoA dioxygenase Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
htxA; alpha-ketoglutarate-dependent hypophosphite dioxygenase
13_1_20cm_2_scaffold_1278_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

13564..15534
DNA (1971bp) protein (657aa)
dehydrogenase, E1 component; K11381 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] Tax=GWA2_Rokubacteria_73_35_curated
Dehydrogenase E1 component n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5ESH0_9RHIZ rbh
dehydrogenase, E1 component
13_1_20cm_2_scaffold_1278_17
unknown

Not on your lists

comp(15643..15780)
DNA (138bp) protein (46aa)

This feature has no annotations

13_1_20cm_2_scaffold_1278_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(15866..16138)
DNA (273bp) protein (91aa)
Lactoylglutathione lyase n=1 Tax=Pandoraea pnomenusa 3kgm RepID=V5PP34_9BURK
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
lactoylglutathione lyase
13_1_20cm_2_scaffold_1278_19
unknown

Not on your lists

16514..18955
DNA (2442bp) protein (814aa)

This feature has no annotations

13_1_20cm_2_scaffold_1278_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(18859..20073)
DNA (1215bp) protein (405aa)
UTP-GlnB (protein PII) uridylyltransferase, GlnD; K00990 [protein-PII] uridylyltransferase [EC:2.7.7.59] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Bifunctional uridylyltransferase/uridylyl-removing enzyme n=2 Tax=Geobacter metallireducens RepID=Q39VR4_GEOMG
glnD; nitrogen regulatory protein P-II uridylyltransferase, GlnD
Displaying 20 items

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