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13_1_20cm_2_scaffold_2705

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_2705_1
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists


comp(3..866)
DNA (864bp) protein (288aa)
phenylalanyl-tRNA synthetase subunit alpha; K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJM4_9FIRM
13_1_20cm_2_scaffold_2705_2
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists


comp(870..1226)
DNA (357bp) protein (119aa)
50S ribosomal protein L20 n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B45C3F
rplT; 50S ribosomal protein L20 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
50S ribosomal protein L20
13_1_20cm_2_scaffold_2705_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists


comp(1245..1442)
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=1 Tax=Peptostreptococcus stomatis DSM 17678 RepID=E0E3Z5_9FIRM
rpmI; 50S ribosomal protein L35; K02916 large subunit ribosomal protein L35 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
50S ribosomal protein L35
13_1_20cm_2_scaffold_2705_4
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(1465..1944)
DNA (480bp) protein (160aa)
Translation initiation factor IF-3 n=2 Tax=Geobacter metallireducens RepID=IF3_GEOMG
infC; translation initiation factor IF-3; K02520 translation initiation factor IF-3 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
translation initiation factor IF-3
13_1_20cm_2_scaffold_2705_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(2048..3739)
DNA (1692bp) protein (564aa)
thrS; threonyl-tRNA synthetase (EC:6.1.1.3); K01868 threonyl-tRNA synthetase [EC:6.1.1.3] Tax=GWC2_Rokubacteria_70_16_curated
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D0U7_PELTS
13_1_20cm_2_scaffold_2705_trna_1
unknown

Not on your lists

comp(3861..3932)
DNA (72bp)
transferRNA
13_1_20cm_2_scaffold_2705_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3923..4384)
DNA (462bp) protein (154aa)
OmpA/MotB protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
13_1_20cm_2_scaffold_2705_7
unknown

Not on your lists

4560..4847
DNA (288bp) protein (96aa)

This feature has no annotations

13_1_20cm_2_scaffold_2705_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(4851..5867)
DNA (1017bp) protein (339aa)
3-deoxy-7-phosphoheptulonate synthase (EC:2.5.1.54); K03856 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
3-deoxy-D-arabino-heptulosonate 7-phosphate synthase n=2 Tax=Geobacter metallireducens RepID=Q39YT5_GEOMG
aroG-2; 3-deoxy-7-phosphoheptulonate synthase
13_1_20cm_2_scaffold_2705_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(6069..6782)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CCL6_DESTA
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_20cm_2_scaffold_2705_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(6801..8201)
DNA (1401bp) protein (467aa)
amidase; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Amidase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C277_SPHTD
amidase
13_1_20cm_2_scaffold_2705_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

8231..9403
DNA (1173bp) protein (391aa)
Uncharacterized protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_20cm_2_scaffold_2705_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(9407..10627)
DNA (1221bp) protein (407aa)
cyclic nucleotide-binding protein Tax=GWA2_Rokubacteria_73_35_curated
Cyclic nucleotide-binding protein alias=gwe2_scaffold_8_836 id=2167992 tax=TA06 species=Oscillochloris trichoides DG-6 genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi
13_1_20cm_2_scaffold_2705_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(10624..11124)
DNA (501bp) protein (167aa)
Cyclic nucleotide-binding protein n=1 Tax=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) RepID=Q0VS63_ALCBS
cyclic nucleotide-binding domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
cyclic nucleotide-binding protein
13_1_20cm_2_scaffold_2705_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(11143..11412)
DNA (270bp) protein (90aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_20cm_2_scaffold_2705_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11470..11778
DNA (309bp) protein (103aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_20cm_2_scaffold_2705_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

11775..12005
DNA (231bp) protein (77aa)
hypothetical protein; K01989 putative ABC transport system substrate-binding protein Tax=GWA2_Rokubacteria_73_35_curated
Displaying 17 items

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